Pseudomonas silvicola: LZ023_07885
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Entry
LZ023_07885 CDS
T10729
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_07885
Transporters [BR:
psiv02000
]
Other transporters
Pores ion channels [TC:
1
]
LZ023_07885
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WAH59457
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Position
complement(1674166..1676034)
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AA seq
622 aa
AA seq
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MRPALLLPLALLCPPDAFADDEPLKLADTLVTANRQRESRDTSTSASTVFTRADIDRLQP
DSVVDLLNRVPGVQVAQSGGRGSLPGIFVRGMQSSQTLVLVDGVRVATATSADSNLQHLG
VDQIERVEVLRGARSAIHGADAMAGVIQIFTRRADQSGLQGRVRVAAGSEGRWQHDLGLS
GADDDSRFALSAGLDESAGINRTHASFASDQDHDAYRNRSLSLTASHYFTDDLEAGFNLL
DNQGKNEYDNPFGRFDPARLTSVGQKPYSDFQLSSFGTYVDARLTERWKSRVELGHSENR
EISRDTLSDEHSVFNTYRDSLGWQNTLRLDERHTLLAGVDMFQDRVNSSTAFDEDSRWNR
AAFVQHSYRGDSFGTQVGWRRDVNQQFGGQNTWSAALTWFVNRSNDLVLSYSEGFRAPTF
NDLYYPGYSNPNLTPEHSKSHELQWRSRLSDTTRLETSLYRIDLSDAIVLDSNFLPQNIG
HARINGAEGVLRQQVLGWESALSVAVIDPRDRDSGHTLTRRARRTLNWELDRRFGALGVG
MTWQAVSRSYNDASNQQRIGGYAVMGLRGSWAVTPQVKIDLKVDNVFDRQYSRVLYEFDG
QAHKYREQGRAWTIGLTWQPAL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgccctgctgctgcccctcgccctgctgtgcccgccggacgcttttgccgac
gatgagccgttgaagctggccgacacgctggtgactgccaaccggcagcgcgaatcccgc
gacaccagtaccagcgccagcaccgtgttcacacgagccgatattgatcgcctgcagccc
gacagcgtcgttgacctgctcaaccgcgtgcctggggtacaggtggcccaaagcggcggt
cgcggcagcctgccggggatcttcgttcgcggcatgcaatcctcccagaccctcgtactg
gtggatggggtgcgggtggccacggccacgtcggccgacagcaacctgcaacacctcggc
gtcgaccagatcgaacgggtggaggtgttgcgtggtgcccgttcggcaattcatggcgcc
gacgccatggcaggggtaatccagatctttacccgccgcgccgatcaatcggggttgcag
ggccgcgtgcgcgtggcggctggcagtgaagggcgctggcagcacgacctcgggctatcc
ggggccgatgacgacagccgcttcgctctcagcgccgggctggacgaaagcgcgggcatc
aaccgaacccatgcatcgtttgccagcgaccaggaccatgacgcctaccgcaaccggtcc
ctgagcttgaccgccagccattatttcaccgacgacctggaggctgggttcaacctgctg
gataaccagggcaagaacgagtacgacaacccttttggccgttttgaccccgcacgcctc
acctcggtcgggcaaaaaccctacagcgactttcagctgagcagtttcggcacttatgtc
gacgcccgcctcaccgagcggtggaagagccgcgtggaactgggccatagcgagaacagg
gaaatatcgcgcgacaccctcagcgacgagcattccgtgttcaatacctaccgcgactcg
cttggctggcagaacaccctgcgcctggatgaacgtcacactctgctggcgggtgtggac
atgttccaggacagggtcaacagcagcaccgctttcgatgaggacagccgttggaaccgc
gcggcgttcgtacagcacagctatcgcggcgacagcttcgggacccaggtcggctggcgc
cgcgacgtgaatcagcagttcggtgggcagaacacctggagcgcggcactgacctggttc
gtcaaccgcagcaatgacctggtgctgtcctacagcgaaggcttccgtgcaccgacgttc
aacgatctctattacccgggctacagcaacccgaacctcacaccggagcattcgaagagc
catgagctgcagtggcgcagccgcctgagcgataccacgcgcctggagacctcgctgtac
cgtatcgaccttagcgacgccatcgtgctggacagcaactttttgccgcagaacattggc
cacgcgcgtatcaacggtgccgagggcgtcttgcgccagcaagtcctcggctgggaaagc
gccctgagcgtagcggtgatcgacccccgcgaccgcgacagcggccataccttgacccgc
cgggcccgacgcacgttgaattgggagctggaccggcgcttcggggcactgggcgtcggc
atgacctggcaagcggtgagccgcagttataacgacgcctccaaccagcaaaggatcggc
gggtacgcggtgatggggttacgcggcagctgggcggtgacgccccaggtcaagatcgac
ctgaaggtagataacgtgttcgatcgccagtacagccgggtgctgtacgagtttgatggg
caggcgcataagtatcgagagcagggacgcgcctggaccattgggctgacgtggcagcca
gcgctctag
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