Pseudomonas silvicola: LZ023_08180
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Entry
LZ023_08180 CDS
T10729
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_08180 (miaB)
Enzymes [BR:
psiv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LZ023_08180 (miaB)
Transfer RNA biogenesis [BR:
psiv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LZ023_08180 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
WAH59510
LinkDB
All DBs
Position
complement(1736975..1738300)
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AA seq
441 aa
AA seq
DB search
MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGEAIRDRAPYVDVVFGPQTLHRLPEMIDAARV
TKLPQVDISFPEIEKFDHLPEPRIDGPTAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEVIHLAENGVREVTLLGQNVNGYRGLTEDGRLADLAELIRVVAAVEGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRVLAAMKRNHTVLEYKSKLRKLKAAVPGI
CISSDFIVGFPGETEKDFEQTMKLVADVGFDFSYSFVYSQRPGTPAADLADDTPEALKKQ
RLEALQHRLNQQGFEISRQMVGTTQRILVTDYSRKDPGELQGRTENNRIVNFACLDAKLI
GQFVDVHIGEARPHSLRGTLI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctctacatcgaaacccacggctgccagatgaacgagtacgacagctcg
cgcatggtcgacctgctgggtgaacatcaagccctggaggtcaccgcacgggcggaggac
gccgatgtcatcctgctcaacacctgctcgattcgcgagcgggcccaggaccgcgtgtac
tcgcaactgggccgctggcgcgagctgaaactggccaacccggagatggtcatcgccgtg
ggcggttgcgtggccagccaggaaggcgaggccatccgcgaccgcgcgccctacgtggac
gtggtgttcggcccgcagaccctgcaccgcctgccggaaatgatcgacgccgcgcgcgtg
accaaactgccccaggtggatatttccttccccgagatcgagaaattcgaccacctgccg
gagccgcgcatcgatggccccaccgcctacgtgtcggtgatggaaggctgcagcaagtac
tgcaccttctgcgtggtgccctacacccgcggcgaagaagtcagccggcctttcgacgac
gtcatcgccgaggtcatccacctggccgagaacggcgtgcgtgaagtgaccctgctgggc
cagaacgtcaatggctaccggggcctcaccgaggacggccgcctggcggacctggccgag
ctgatccgcgtggtggccgccgtcgaaggcatcgaccgcatccgctacaccacctcgcac
ccgctggagttctccgacagcctgatccaggcccacgccgaagtgccggaactggtgaaa
cacctgcacttgccggtgcagtcgggctccgaccgggtgctggcggccatgaagcgcaac
cacacggtgctggagtacaagtccaaactgcgcaagctgaaggccgcggtaccgggcatc
tgcatcagttcggacttcatcgtcggcttccccggcgaaaccgagaaggacttcgaacag
accatgaagctggtggccgacgtgggcttcgacttctcctactcgttcgtctacagccag
cgcccgggcaccccggccgcggaccttgccgacgacaccccggaggccttgaagaagcaa
cgcctggaggccttgcagcaccgtctgaaccagcagggcttcgagatcagccgacagatg
gtgggtaccacccagcggattctggtcaccgactactcgcgcaaggacccaggcgagctg
cagggccgcaccgagaacaaccggatcgtcaacttcgcctgcctcgacgccaagctgatt
ggccagttcgtcgacgtgcacatcggcgaagcacgcccccactcgctgcgcggcacgctg
atctga
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