Pseudomonas silvicola: LZ023_09670
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Entry
LZ023_09670 CDS
T10729
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00470
D-Amino acid metabolism
psiv00550
Peptidoglycan biosynthesis
psiv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LZ023_09670 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LZ023_09670 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psiv01011
]
LZ023_09670 (murD)
Enzymes [BR:
psiv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LZ023_09670 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psiv01011
]
Precursor biosynthesis
Amino acid ligase
LZ023_09670 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WAH59780
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All DBs
Position
2071829..2073175
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AA seq
448 aa
AA seq
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MSLIASDQFRIVVGLGKSGMSLVRFLARRGVAFAVADTRANPPELATLRRDYPQVEVRCG
ELDVEFLCRASELLVSPGLALATPALQQAAARGVTLSGDIELFARNAQAPIVAISGSNAK
STVTTLVGDMAAAAGKRVAVGGNLGTPALDLLADDVELYVLELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVYNRQDALTRPLMGEGLPCWTFGLNKPD
FKAFGLREENGQTYLAFEFQNLMPVSELKIRGSHNQANALAALALGHAVGLPFEPMLATL
RTFAGLAHRCQWLRERDGVSYYDDSKATNVGAAVAAIEGLGADIDGKLVLVAGGDGKGAD
FSGLQAPVAAHCRAVVLLGRDAELIAAALGDRVPLVRVKTLDEAVEQCAALAQPGDAVLL
SPACASLDMFKNYEERGRLFAQAVEGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccaattccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgcttcctggcgcgccggggcgttgcctttgccgtggccgacacgcgcgcg
aatccgccggagctggcgacgctgcgccgtgactacccgcaggtggaagtacgttgcggc
gagctggacgtggagttcctgtgccgcgccagcgagctgctggtcagccccggcctggcg
ctggccacgccggcgctgcagcaggcggccgcccgtggcgtgacgctgtcgggtgacatc
gaactgttcgcgcgtaacgcgcaagcgcctatcgtcgccatcagcggttccaatgccaag
agcaccgtcaccaccctggtgggcgacatggccgctgccgccggcaagcgcgtcgcggtg
ggcggcaacctcggcaccccggccctcgacctgctggccgacgacgtcgaactgtacgtg
ctggaactgtcgagcttccagctggaaaccaccgaccagctcaatgccgaagtggccacc
gtgctgaacatcagcgaagaccacatggaccgttacagcggcctgccggcgtaccacctg
gccaagcaccggatcttccgtggcgcacgccaggtggtctacaaccgccaggacgccctg
acccgccccctgatgggcgaggggctgccgtgctggaccttcggcctgaacaagcccgac
ttcaaggcctttggcctgcgcgaagagaacggccagacatacctggcgttcgaattccag
aacctgatgccggtcagcgagctgaagatccgcggttcgcacaaccaggccaacgccctg
gctgccctggccctgggccacgccgtaggcctgccgttcgagccgatgctggctacgctg
cgtaccttcgccgggctggcccatcgttgccaatggctgcgcgagcgtgacggcgtcagc
tactacgacgactccaaggccaccaacgtcggtgctgccgtggccgccatcgaaggcctg
ggtgccgacatcgatggcaagctggtgctggtggctggtggtgatggcaagggtgccgac
ttctccggcctccaggcaccggtggctgcccattgccgcgccgtggtgctgctgggccgc
gacgctgaactgattgccgccgccctgggcgaccgtgtgccgctggtgcgggtcaagacc
ctcgacgaagccgtcgaacaatgcgcggccctggcccagcccggcgatgccgtgctgttg
tcgccagcctgcgcgagcctggacatgttcaagaactatgaagagcgtgggcgcctgttc
gcccaggccgtggagggcttgtcatga
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