Pseudomonas silvicola: LZ023_09800
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Entry
LZ023_09800 CDS
T10729
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZ023_09800 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiv03019
]
LZ023_09800 (groL)
03110 Chaperones and folding catalysts [BR:
psiv03110
]
LZ023_09800 (groL)
03029 Mitochondrial biogenesis [BR:
psiv03029
]
LZ023_09800 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiv04147
]
LZ023_09800 (groL)
Enzymes [BR:
psiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LZ023_09800 (groL)
Messenger RNA biogenesis [BR:
psiv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LZ023_09800 (groL)
Chaperones and folding catalysts [BR:
psiv03110
]
Heat shock proteins
HSP60 / Chaperonin
LZ023_09800 (groL)
Mitochondrial biogenesis [BR:
psiv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LZ023_09800 (groL)
Exosome [BR:
psiv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LZ023_09800 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LZ023_09800 (groL)
Exosomal proteins of breast cancer cells
LZ023_09800 (groL)
Exosomal proteins of colorectal cancer cells
LZ023_09800 (groL)
Exosomal proteins of bladder cancer cells
LZ023_09800 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
WAH59804
LinkDB
All DBs
Position
2101114..2102757
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKAMSKPCADSKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVVLSKENTTIIDGAGVEADIQARVTQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALLAISALEGDNADQNVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGRGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKDDAPAAGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgactccgcccgcaagaaaatgctgactggcgtt
aacgttctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtcgccaaggaaatc
gagctcaaggaccgcttcgaaaacatgggcgcgcagctggtcaaggacgttgcctcccgt
gccaacgatgacgctggcgacggcaccaccaccgccaccgttctggctcagtcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcgaccatcgccattgtcaaagagctgaaagccatgtccaagccatgcgctgac
tccaaagccatcgctcaggtcggtaccatttcggcgaactccgactcctcgatcggtgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtcatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgttgaaggcatgcagttcgaccgcggctacctg
tccccttacttcgtcaacaagccagacaccatggtcgccgagcttgacggcccgctgatc
ctgctggttgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccactgctgatcgtggctgaagacgttgaaggtgaagcgctggcg
accctggtcgtgaacaacatgcgcggcatcgtcaaggttgctgccgtcaaggcgccaggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgctgttctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcacgaccctggagcacctgggtaacgcc
aagcgcgtcgttctgtcgaaagaaaacaccaccatcatcgacggtgctggcgtcgaggct
gacatccaggctcgcgttacccagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgctgcggtcgaagaaggcgtggtgcctggcggtggcgtggccctggtt
cgtgcactgctggccatctccgcgctggaaggcgacaacgccgaccagaacgtaggtatc
gctctgctgcgtcgcgctgttgaagcgccactgcgccagatcgtcgccaactccggtgac
gagccaagcgtggttgtcgacaaggtcaagcaaggccgtggcaactacggctacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccagccaaagtgacc
cgttcggcactgcaggctgcttcctcgatcgccagcctgatgatcaccaccgaagccatg
atcgccgagatcaaggatgatgctcctgcggctggcggcatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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