Pseudomonas silvicola: LZ023_10410
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Entry
LZ023_10410 CDS
T10729
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiv03009
]
LZ023_10410
Enzymes [BR:
psiv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LZ023_10410
Ribosome biogenesis [BR:
psiv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LZ023_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WAH59916
LinkDB
All DBs
Position
complement(2237496..2238188)
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDRFLSNLPQLNRKQVRLLLVDRRVRVDGQVVSDPHHEVREFSQVLLDDQVLQAGRPA
RYFMLHKPMGCVSATVDPQHPTVLDLLHEPDKDDLHLAGRLDYNTSGLMLITNDGQWSRR
LTQPQTKLGKVYYVETEQVIDQRYVETFARGIYFSFEDLTTQPAELIVLGQRSARLTIVE
GRYHQVKRMFGHFQNKVLRLHREQMGPLTLDPELPPGHYRALTAEEIQQI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgaccgattcctgagcaacctgccccagctcaaccgcaagcaggtacgcctg
ttgctggtggaccggcgtgtgcgcgtagacggccaggtggtcagcgacccgcatcatgaa
gtgcgtgagttcagccaggtgctgctcgatgaccaggtgctgcaagcagggcggccagcg
cgctatttcatgctgcacaagcccatgggctgcgtcagcgctaccgtcgacccgcagcac
cccaccgtcctggacctgctgcacgagccggacaaggacgacctgcacctggccggccgc
ctggactacaacacctccgggctgatgctcatcaccaacgacggccaatggtcacggcgt
ctcacacagccacagaccaagctgggaaaggtctactatgtggaaaccgagcaagtcatc
gaccagcgctacgtcgaaacctttgcccgcggcatttatttttctttcgaagatctgacc
acccagcctgccgaattgatcgtattgggccaacgcagcgcacgactgacgatcgtcgaa
ggccgctaccaccaggtcaagcgaatgttcggtcacttccaaaacaaggtgttacggctg
catcgtgagcaaatgggtccactgacccttgatccagagctgccgccaggccactaccga
gcgctgaccgctgaagagattcagcagatctag
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