KEGG   Pseudomonas silvicola: LZ023_10525
Entry
LZ023_10525       CDS       T10729                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psiv  Pseudomonas silvicola
Pathway
psiv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psiv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LZ023_10525 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiv03019]
    LZ023_10525 (rnc)
   03009 Ribosome biogenesis [BR:psiv03009]
    LZ023_10525 (rnc)
   03036 Chromosome and associated proteins [BR:psiv03036]
    LZ023_10525 (rnc)
Enzymes [BR:psiv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LZ023_10525 (rnc)
Messenger RNA biogenesis [BR:psiv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LZ023_10525 (rnc)
Ribosome biogenesis [BR:psiv03009]
 Eukaryotic type
  90S particles
   RNase
    LZ023_10525 (rnc)
 Prokaryotic type
  rRNA processing factors
   LZ023_10525 (rnc)
Chromosome and associated proteins [BR:psiv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LZ023_10525 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: WAH59939
LinkDB
Position
2259923..2260612
AA seq 229 aa
MSVSLSRLERQLGYTFKNQDLMVLALTHRSFAGRNNERLEFLGDAILNFVAGESLFERFP
QAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEVARERVLSWLTSEFDSLTLVDTNKDPKTRLQEHLQSRGCDLPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagtgtttccttgagccgtctcgagcgtcagctcggctatacctttaaaaaccaggac
ctgatggtgctggccttgacacaccgcagcttcgcggggcgcaacaacgaacgcctcgag
ttcctcggtgatgccatcctcaatttcgtggcgggcgaatcgttgttcgaacggttcccc
caggcccgcgaaggccagctgtcgcgcctgcgcgcccggctggtgaaaggcgagaccctg
gccgtgctggcccgtggtttcgacctgggcgaatacctgcgcctgggcagcggtgaattg
aagagcggcggcttccgccgcgagtcgatcctggccgatgccctggaagcactgattggt
gccatctatctggattcgggcatggaagtggcccgcgagcgcgtgttgtcctggctgacc
agcgagttcgacagcctgacgctcgtagacaccaacaaggaccccaagacccgcctgcag
gaacacctgcagtcgcggggctgcgacctgccgcgttacgaagtggtggatatccagggc
gaaccgcattgccggacgtttttcgtcgaatgtgaagtggtccttttgaacgaaaaaagc
cggggtcagggcgtgagccgtcgcattgccgaacaggtagcggccgcatcagcactgata
gccctgggcgtggagaatggcaatgactga

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