Pseudomonas silvicola: LZ023_10560
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Entry
LZ023_10560 CDS
T10729
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00260
Glycine, serine and threonine metabolism
psiv00460
Cyanoamino acid metabolism
psiv00630
Glyoxylate and dicarboxylate metabolism
psiv00670
One carbon pool by folate
psiv00680
Methane metabolism
psiv01100
Metabolic pathways
psiv01110
Biosynthesis of secondary metabolites
psiv01120
Microbial metabolism in diverse environments
psiv01200
Carbon metabolism
psiv01230
Biosynthesis of amino acids
psiv01240
Biosynthesis of cofactors
psiv04981
Folate transport and metabolism
Module
psiv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZ023_10560
09102 Energy metabolism
00680 Methane metabolism
LZ023_10560
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LZ023_10560
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LZ023_10560
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LZ023_10560
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LZ023_10560
Enzymes [BR:
psiv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LZ023_10560
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WAH59946
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Position
complement(2267190..2268443)
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AA seq
417 aa
AA seq
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MFSKSLTLADFDPALNDAIALEARRQEQHIELIASENYTSPAVMQAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKQLFGADYANVQPHSGSQANAAVFLALLQPGDTVLGMS
LAHGGHLTHGAKVSFSGRLYNAVQYGIDDQGLIDYDEVERLAVQHQPKMLIAGFSAYSRT
LDFARFRAIADKVGAWLFVDMAHVAGLVAAGLYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARSNPTVEKKLDSAVFPGGQGGPLMHVIAAKAVCFKEALAPAFKVYQRQVIDNARAMAGV
FVARGYDVVSAGTDNHLFLVSLIRRGITGKDADAALGRVHITVNKNAVPNDPQSPFVTSG
LRIGTPAVTTRGFGEAECTRLAGWICDVLDHLGDADVEAEVAAQVAALSKAFPVYGR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaaagcctcaccctcgccgacttcgaccccgccctgaacgatgccattgcc
ctggaagcccgccgccaggagcaacacatcgaactgatcgcctccgagaactacaccagc
cccgccgtgatgcaggcccaaggcagtgtgctgacgaacaaatacgccgagggttacccg
ggcaagcgctactacggcggctgtgaacacgtggacgtggtcgagcaactggccatcgac
cgggccaagcaattgttcggcgccgactacgccaacgttcaaccgcactctggcagccag
gccaacgctgcggtattcctggccctgctgcaaccgggtgacaccgtgctgggcatgagc
ctggcccacggcggacatctgacccatggcgccaaggtcagtttttccggccggctgtat
aacgcggtgcagtacggcatcgatgaccaggggctgatcgactatgacgaggtggaacgc
ctggctgtgcagcatcaacccaagatgctgatcgccggcttctcggcctattcgcgcacc
ctggatttcgcacgcttccgagccatcgccgacaaggtgggcgcctggttgttcgtggac
atggcccacgtcgccggcctggtcgccgccgggctctaccccaacccggtgccttacgcg
gacgtggtcactaccacgacccacaagaccctgcgtgggccgcgcggtggcctgatcctg
gcgcgcagcaaccctaccgtggagaagaagctggactcggcggtctttcccggcggccaa
ggtggcccgctgatgcacgtcatcgccgccaaggcggtgtgcttcaaagaggccctggcc
ccggcgttcaaggtgtatcagcggcaggtcatcgataacgcccgtgccatggccggggtg
tttgtggcgcgcggctatgacgtggtgtccgccggtaccgataaccacctgttcctggtc
agcctgatccgccgcggcattaccggcaaggacgccgacgccgcgctgggccgcgtgcac
atcaccgtcaacaagaacgccgtgcccaacgacccgcagtcgcctttcgtgacctcgggc
ctgcgcatcggcacgcccgccgtcaccacccgcggctttggcgaagccgaatgcacgcgc
ctggcgggctggatctgtgatgtgctcgaccacctgggcgacgccgacgtggaagccgaa
gtggccgcgcaggtggccgcgctgagcaaggctttcccggtttacgggcgctga
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