Pseudomonas silvicola: LZ023_10600
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Entry
LZ023_10600 CDS
T10729
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_10600 (cmoB)
Transfer RNA biogenesis [BR:
psiv03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LZ023_10600 (cmoB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
CMAS
MTS
FtsJ
PrmA
Motif
Other DBs
NCBI-ProteinID:
WAH59954
LinkDB
All DBs
Position
complement(2275280..2276236)
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AA seq
318 aa
AA seq
DB search
MIDLAPLVRRMAGTPLATWSEGLQAQLDAKMQKGHGDLERWQAALDALPALHPSDIELAQ
SLTLDCPCDDATRQQLHDALMGLSPWRKGPFNLFGVHVDTEWRSDWKWTRVAPHLDLKGK
RVLDVGCGNGYYQWRMLGAGADSVIGVDPNWLFFCQFQAVQRYLPDLPAWHLPFALEDLP
ANLEGFDTVFSMGVFYHRRSPIEHLLALKDCLVKGGELVLETLVVPGDKHQVLVPEDRYA
QMRNVWFLPSVAALELWLRRAGFRDIECVDVSITTVQEQRSTEWMKYQSLGDFLDPNDHS
RTIEGLPAPMRAVIKARK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctagcccccctggtccgccgcatggcgggcacgcccctggccacgtggagc
gagggcctgcaggcccagctcgacgccaagatgcagaaaggccacggtgacctggagcgc
tggcaggcggcactcgatgccctgccggcgctacaccccagtgacatcgagctggcccag
agcctgacgctggactgcccctgcgacgacgccacccgccagcagctgcacgacgccctg
atggggctgtcgccctggcgcaaaggcccgttcaacctgttcggcgtgcacgtggacacc
gagtggcgatcggactggaaatggacccgggtagccccgcacctggacctcaagggcaag
cgcgtgctcgacgtgggctgcggcaacggctactaccagtggcgcatgctcggcgctggt
gccgacagcgtcatcggcgtggaccccaactggctgttcttctgccagttccaggccgtg
cagcgctacctgcccgacctgcctgcctggcatctgcccttcgcccttgaagacctgccg
gcgaacctggaaggctttgacacggtattttccatgggcgtgttctaccatcgccgttcg
cccatcgaacacctgctggcgctgaaggactgcctggtcaagggcggcgaactggtgctg
gaaaccctggtagtgcccggcgacaagcaccaggtgctggtaccggaagaccgctacgcg
cagatgcgcaacgtgtggttcctgccctcggtggcagccctggaactgtggctgcgccgc
gccgggttccgcgacatcgagtgcgtggacgtgagcatcaccacggtgcaggaacagcgc
agcaccgaatggatgaagtaccagtcactgggcgacttcctcgaccccaatgaccacagc
cgcaccatcgaaggcctgccagcgccgatgcgcgccgtgatcaaggctcgcaagtag
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