Pseudomonas silvicola: LZ023_11835
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Entry
LZ023_11835 CDS
T10729
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_11835 (truD)
Enzymes [BR:
psiv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LZ023_11835 (truD)
Transfer RNA biogenesis [BR:
psiv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LZ023_11835 (truD)
Prokaryotic type
LZ023_11835 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WAH60179
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All DBs
Position
2534427..2535485
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AA seq
352 aa
AA seq
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MTEFELLGPCAAGPALGRAVLKATADDFQVDEVLDIPLAGEGEHLWLWVEKRNLNTEEAA
RRLAKAAGVPLRTVSYAGLKDRQALTRQWFSLHLPGKADPDLRAAENETLSILKVARHKR
KLQRGAHSANGFTLRLTGLQADREALDARLKQLSQTGVPNYFGTQRFGFQGGNVHDARQW
AERQALPEQRNVRSRLLSTARSYLFNQVLAARVADGTWNQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPLWGEGDSPATGAIHALEQNVGAALAPLGQWLAKAGMAHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLLPAGHTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgagttcgaattgctgggcccctgcgccgccgggcctgcactgggccgtgccgta
ctgaaagccaccgccgacgactttcaggtcgacgaggtgctggatattcccctggcgggc
gagggcgagcacctctggctgtgggtggaaaaacgcaatctcaacaccgaggaagcggcc
cgtcgcctggccaaggccgctggcgtgccgctgcgcaccgtcagctatgccgggttgaag
gaccgtcaggcgctgacccgccagtggttcagcctgcacctgccgggcaaggccgatcct
gacctgcgtgctgccgaaaacgaaaccctgagcatcctcaaggtggcccggcacaagcgc
aagctgcagcgcggcgctcactcggccaacggctttaccttgcgcctgaccgggctgcag
gccgaccgcgaggcgctggacgccaggctgaagcaattgagccagactggcgtaccgaat
tacttcggtacccagcgcttcggttttcaaggtggcaacgtccatgatgctcgtcagtgg
gccgagcgccaggccctgcccgagcagcgcaacgtgcgctcgcggttgctgtcgacggcg
cgcagctatctgttcaatcaggtactggcggcaagggtggccgacggtacctggaaccag
gcccaggtcggcgacctgctggcgttcaccgacagccgcagcttcttcccggccggtgag
gccgagtgcagcgacccacgcctggccattctcgacctgcaccccaccggcccgttgtgg
ggcgaaggtgactcgccggctactggcgccatccatgcattggaacagaatgtcggtgcg
gctctggcgccgcttggtcaatggctggcaaaagcgggcatggcgcacgaacgacgcatc
ctgcggctgcccatcggcggtttgacgtggcattatccagagcctgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccaccgtcgtggtgcgcgagctcgtcgatctg
ctgcctgcagggcacacggacagcccatgcgtattctga
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