Pseudomonas silvicola: LZ023_12165
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Entry
LZ023_12165 CDS
T10729
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
psiv Pseudomonas silvicola
Pathway
psiv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LZ023_12165 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psiv02044
]
LZ023_12165 (tssK)
Secretion system [BR:
psiv02044
]
Type VI secretion system
Imp/Vas secretion system core components
LZ023_12165 (tssK)
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Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WAH60228
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Position
2590544..2591899
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AA seq
451 aa
AA seq
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MKIARPLWASGVLLSPQQFQQQARWEAWTNECLAHLAVAHPWGVEAVEFDLQALRLGKLQ
PSRLRVRLGDGTLIDTEAADAMPGAIEPDQLLPAETHDAIVLLALPLEQANGDNCLFEGA
RGDHPQRYRQVWRPVQDAYGDDIQPIGVLEHMLSLRLGSSGHAGYVTCPVARVVRDGQRG
WLLDPSFVPPLMSFAGHPGLVVQLNNLLTQLSAKRQRLMGMRRESNQRMADFAVADVSLF
WLLTALNTYQPVLADISACPARHPEQVYLELVKLAGALLTFSLEHDVTQIPPYHHHALSE
VLPPLMGLISVLLEASLPSRVLALELEEKGACRWQVTLKDPRLREPGCADFYLSVRCRLP
VAQVQNQFPRLCKVGTPDDVDHLVNAALDGVPLQPLSHVPAAIPLRLENQYFALDFTHAR
GVAVLAEGVCAFYVPTTLTEVKLELYAVLRS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgctcgccccctctgggcctccggggttttgctgtccccgcaacaattccag
caacaggcccgatgggaagcctggaccaatgaatgcctggcccatctggcggtggcacac
ccttggggcgtggaagcggtcgaattcgatttgcaggcgttgcgcctgggcaagcttcag
ccttcaaggctgcgcgtacgcctgggtgacggcacgctgatcgataccgaggcggcggac
gccatgccgggggcgatcgaacccgaccagctcctgccggcagaaacccacgacgccatc
gtgttgctcgccttgcccctggagcaggccaacggcgacaactgcctgttcgagggcgcc
aggggggaccacccccagcgttaccggcaagtgtggcgaccggtccaggacgcctatggt
gacgatatccagccgataggggtgctagaacacatgctcagtctacggctgggtagcagt
ggccacgccggttacgtcacctgcccggtcgcgcgggtggtcagggacggccaacggggg
tggttgctggacccttcgttcgtgccgccactgatgagcttcgccgggcatcctgggctg
gtggtgcaactgaacaacctgctgacgcagttatcggccaagcgccagcggctgatgggc
atgcgccgagaaagcaaccagcgcatggctgatttcgccgtggccgatgtatcgctgttc
tggctgctcactgccttgaacacctaccagcccgttctcgccgatatcagcgcttgcccg
gctcggcaccccgagcaggtctacctggagctggtgaagctggccggtgcattgctcacc
ttttccctggaacacgacgttacccagattccgccttatcaccatcacgccttgagcgag
gtgttaccgccattgatggggctgatctcggtattgctcgaggccagtctgccatcgcgg
gttcttgccctggagcttgaggaaaaaggggcgtgccgctggcaggtgacgctcaaagac
ccccgcctgcgcgagcccggctgcgccgacttctacctgtcggtccgttgtcggctaccg
gtggcgcaggtgcagaaccagttcccgcggttgtgcaaggtgggtacgcccgatgacgtc
gatcatttggtcaacgctgcgcttgatggtgtgccactgcagccactcagccatgtcccg
gctgccattcccctgcggctggagaaccagtacttcgccctcgacttcacccacgccagg
ggagtggcggtgcttgccgagggcgtttgcgccttctatgtgcccaccacgctcaccgag
gtgaaactcgaactctatgcggtattgcgctcatga
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