KEGG   Pseudomonas silvicola: LZ023_12230
Entry
LZ023_12230       CDS       T10729                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
psiv  Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:psiv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psiv02044]
    LZ023_12230 (tssF)
Secretion system [BR:psiv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LZ023_12230 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WAH60239
LinkDB
Position
2607598..2609367
AA seq 589 aa
MSKDNLTLQYFEAEMRYLREAGHEFAQAYPDRAAQLNLDKPGAHDPYVERLFEGFAFLMG
RLREKLDDDLPELTEGLVSLLWPHYLRTIPSLSVVELAPDVATLSRSERIEQGFEVLSQP
IGPQRTRCRYTTTQAMTLRPLTVDKLHLGHDAQGRSRLRIRFSRGPTAAWRDMDLANLVL
YLNGDAPLANALHHALTLNAQAVYLHVPEAAQPLAVDAYFAPKGFADEDRLWPKGDSAFS
GYQLLLEYFTFREKFMFVTLRGLEHLQLPPDALWFEVDVLLKQAWPQDLTVSREHLCLHA
VPVINLFVLEADPLVLDPLQTDYLLRSMRLQDGHTEIYSVDHVTGTRDGKRYDYVPFASF
RHKGGMLRDEAPERYFHARLKKGVNGLHDTWLVLGGEGFDKDRLVGNECLSLTLTGTHGQ
LPRKALQSSLIDAVVEAAQAGLRVRNLCPPTLPCYPPSRDRFHWRVLSHLGSNFLPMLDS
AQVLRGTLALYDWTASELNRRRLDAIVEVRHLIIKRFEKGFMLRGVDIEITLDASGFCGE
GDIHLFGEMLNRFFALYADIHLFNQLTLILQPTGNCLRWSENHSQRIPG
NT seq 1770 nt   +upstreamnt  +downstreamnt
gtgagcaaggataatttgaccctgcagtatttcgaggccgagatgcgttacctgcgcgag
gcaggccacgagttcgcccaggcctaccctgaccgcgccgcgcagctgaacctggacaaa
cccggcgcccacgacccctacgtggagcgcctgttcgaaggctttgcgttcctgatgggg
cgcctgagggagaagctcgacgatgacctgccggagttgaccgaaggcttggtcagcctg
ctgtggcctcactatctgcgtaccattccctcgttgtcggtggtggaactggcgccagac
gtcgccacgctcagccgcagcgagcgtatcgagcagggctttgaagtgttgtcacagccc
atcggtccccagcgcacccgatgccggtacaccaccacccaagcaatgaccctgcgcccg
ctgacggtggacaaacttcacctcggccatgacgcacagggccgctcacggctgcggata
cgcttttcccgcggcccgacagctgcctggcgtgacatggacctggccaacctggtgctg
tacctcaacggcgatgcccccctggcaaacgccctgcaccatgccttgacgttgaacgcc
caggcggtttacctgcacgtgccagaggctgcgcagcccctggcagtggacgcttatttc
gcgcccaagggctttgccgacgaggaccgtctctggcccaaaggcgatagcgcattcagc
ggctaccagttgctgctggaatacttcacgtttcgcgagaagttcatgttcgtgaccctg
cgggggctggagcatctgcagttgccgcccgacgcgctgtggttcgaagtggacgtactg
ctcaagcaagcctggccccaggacttgacggtgagccgcgagcacctctgcttgcacgcg
gtgccggtcatcaacctgttcgtgctggaggccgaccccctggtgcttgatcccctgcag
accgactacctgctacgctcgatgcgcttgcaggacggccacacggaaatctattccgtg
gaccacgtcaccggcacccgtgatggcaagcggtatgactacgtacccttcgccagtttc
cgccacaaaggcggcatgctgcgcgacgaggcgcccgagcgctatttccatgcacggctg
aaaaagggcgtgaacggcttgcacgacacctggctggtactgggaggagagggtttcgac
aaagaccggttggtcggcaacgaatgcctgtcattgaccctcaccggcacccacgggcaa
ttgcctcgcaaagccctgcagagcagcctgatcgacgccgtggtggaggcggcccaggct
ggcctgagagtacgcaacctgtgcccgccgacgttaccgtgctacccgcccagccgcgac
cgttttcactggcgggtgctgagccacctggggtccaattttctgccgatgctcgatagc
gcgcaggtgctgcgcggtaccctggcgctctacgactggacggcgagcgagctcaaccgg
cgacgtctggacgcgatcgtcgaggtgcgccacctgatcatcaagcggtttgaaaagggt
ttcatgcttcgtggcgtagacatcgaaatcacgctggacgccagcggcttttgcggcgaa
ggcgacatccacctgttcggcgaaatgctcaaccgtttcttcgccctgtatgccgacatt
catcttttcaaccagctcacactgatcctgcaacccaccggcaactgcctgcgatggagc
gaaaaccacagccagaggattcccggatga

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