Pseudomonas silvicola: LZ023_12585
Help
Entry
LZ023_12585 CDS
T10729
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiv03032
]
LZ023_12585 (gyrA)
03400 DNA repair and recombination proteins [BR:
psiv03400
]
LZ023_12585 (gyrA)
Enzymes [BR:
psiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LZ023_12585 (gyrA)
DNA replication proteins [BR:
psiv03032
]
Prokaryotic type
DNA Topoisomerases
LZ023_12585 (gyrA)
DNA repair and recombination proteins [BR:
psiv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LZ023_12585 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WAH60307
LinkDB
All DBs
Position
2697733..2700375
Genome browser
AA seq
880 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRIVIELRRGEVPEVILNNLYAQTQMQAVFGINVVALIDGRPRVLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTAWESSA
VVAMVEAAGAESSRPENLDPQYGLRDGKYWLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAARLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHFIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRIAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELLEGEEGFEAPVDGVDAPEDVAGDDELPQE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgagacagtcc
tacctcgactacgcgatgagcgtcatcgtcgggcgtgcactgcctgatgcgcgtgatggc
ttgaagcccgtgcatcgccgcgttctgtttgcgatgagcgagctgggtaacgactggaac
aaaccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccccac
ggtgacaccgcggtctacgacaccatcgttcgcatggcccagcctttctccctgcgctac
ctgctggtggacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtacgcatgaccaagctggcgcacgaactgctggctgacctgcacaag
gaaaccgtggactgggtgcccaactacgacggcaccgaacagattccggcggtgatgcca
acgcgcatccccaacctgctggtcaacggttccagcggcatcgccgtgggcatggccacc
aacattccgccgcacaacctgggcgaagtcatcgacggctgcctggcgctgatcgacaac
gccgacatcaccatcgatgaactgatgcagttcattcctggccccgacttcccgaccgcc
gccatcatcaacggccgcgccggcatcatcgaagcctaccgcaccggtcgtggccgcatt
tacatgcgcgcccgctccacggtggaagacatcgacaaggtcggtggccgccagcagatc
gtcgtcaccgagctgccgtaccagctgaacaaggctcgcctgatcgagaagatcgccgag
ctggtgaaagagaagaaactggaaggtatcaccgagctgcgcgacgagtccgacaaggac
ggtatgcgtatcgtcatcgagctgcgccgtggcgaagtgcctgaggtcatcctcaacaac
ctgtacgcccagacccagatgcaggccgtgttcggcatcaacgtcgtcgcgctgatcgat
ggccgtccacgtgtgctgaacctcaaggacctgctcgaggcattcgtgcgtcaccgccgc
gaagtggtgacccgccgtaccgtcttcgaactgcgcaaggcccgcgagcgtggccatatc
ctggaaggccaggccgtggcgttgtcgaacatcgacccggtcatcgccctgatcaaggcc
tcgccaacgccttccgaggccaaggaagccctggtcagcaccgcctgggaatccagcgcc
gtggtggccatggtggaagcggccggcgccgagtcctcgcgccccgagaatctggacccg
caatatggcctgcgtgatggcaagtactggctgtcgccggaacaggcccaggccatcctc
gacctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgcgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgatgtgcgccgcacc
gagattctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccactggctgcctaccaggcc
cagcgccgcggcggcaagggcaagtcggccaccggcgtgaaggatgaagactacatcgct
cacctgctggtagcgaacagccataccaccctgctgctgttctccagcaaaggcaaggtc
tactggctcaagacctacgagatcccggaggcctcccgtgccgcccgtggtcgcccgctg
gtcaacctgctgccgctggacgatggcgagtacatcaccaccatgctgccggtcgaggaa
tacaccgaaggccacttcatcttcatggccaccgccaacggcaccgtgaagaagaccccg
ctggagtccttcagccgtcagcgcagcgtcggtctgattgccctggaactggacgagggc
gacgtactgatctccgccgccatcaccgacggcgaacgtgaagtgatgctgttctccgac
ggcggcaaggttacccgcttcaaggagtccgacgtacgggccatgggccgtatcgcccgc
ggcgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcactgcttccgagcgtggttatggtaagcgtaccgccatcagc
gagttccccgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgc
aacggccgcctggtcggggctgtacaggtactggacggtgaggagatcatgctgatctcc
gaccagggtaccctggtgcggacccgtgtcggtgaagtctccagcctgggccgtaacacc
cagggcgtcaccttgatcaagctggccagcgacgaaacgctggtaggcctggagcgggtg
caggagccatcggaagtcgagggcgaggaattgctcgaaggcgaagaaggcttcgaagcg
ccggtggacggtgtcgatgcaccggaagacgtcgcgggtgacgatgagttgccgcaggaa
taa
DBGET
integrated database retrieval system
