Pseudomonas silvicola: LZ023_13115
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Entry
LZ023_13115 CDS
T10729
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv02020
Two-component system
psiv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZ023_13115
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LZ023_13115
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiv01001
]
LZ023_13115
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psiv02022
]
LZ023_13115
Enzymes [BR:
psiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LZ023_13115
Protein kinases [BR:
psiv01001
]
Histidine kinases
Other
LZ023_13115
Two-component system [BR:
psiv02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
LZ023_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
PDE8A_N
CHASE8
Motif
Other DBs
NCBI-ProteinID:
WAH60403
LinkDB
All DBs
Position
complement(2800907..2803228)
Genome browser
AA seq
773 aa
AA seq
DB search
MDIKFTHRLSYKQARLTVVVGFIIGTLLSIVQIGIDYANVDLAINREMVSLLEISHNPAS
RIAYNIDAELAKELTAGLLHSESIVGARLSDNNNTVLANVSRPRTESRYRMISDFLFGER
RTYDDPLFLSHMPSERLGTLHLDVDTFAFGLRFLRRAEITLFSGFLRSLLLAGIMLGLFY
TMLTKPLVRVISALSNSNPHAAKPTKLDYPPGHEHDEIGVLVRAANQQFVSMSTEIQQRR
TAENRLTEYLAELENIVSARTTELKASNIRLSLSNEELENARRTALDMAQARAAFLANMS
HEIRTPLNGLLGMIALSLDSPLTAEQRQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
ERIPFDLGALVEDTANLLSQNAAPSVELTCLIAPTFPSMVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSTYPGGVSIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQFGGTGLGLA
LTNNLCEAMQGRLSISSEAGFGSRFSADLPLLTHTPAIAPPPLKGKVLAISPASSGLAEL
LENLLPGWGLEYQRLGTDAPLEGLKPDLLITDCLDCLFGLRPAIDAPILLVTAYGNFLPT
EQATALSPLQQQARPLARNALYQTLKRTLLGDEPTQQQALERGEAAQRRARILLVEDNPV
NQLVAKGMLSKLGCEVTVAAHGGEALAALEDREYDLVLMDCNMPVMDGYEASRRIRQSGR
WPQMPIVALTANAMPEERERCRAAGMSDYLAKPFRREELVTLIDHWVPIAPAP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatataaagtttacccatcggctgtcgtacaagcaggctcgactgacggtagtggtc
ggcttcatcatcgggacattgttgagcattgtgcagatcggcatcgattatgccaacgtc
gatctggccatcaaccgcgagatggtgtcgttgctggagatcagccacaaccccgcctcg
cgcatcgcctacaacatcgacgccgaactggccaaggaactgaccgccggcctgttgcac
tccgagtccatcgtcggcgcacgcctgtccgacaacaacaataccgtgctggccaacgtc
agccgcccgcgcacggaaagccgctaccggatgatcagcgacttcctcttcggcgagcgc
cgcacgtacgatgaccccctgtttctgagccatatgcccagtgaacgcctgggtacccta
cacctggacgtggacaccttcgcgttcgggctgcgctttctgcgccgcgccgaaatcacc
ctgttttccggcttcctgcgcagcctgctgctggcaggcatcatgctgggcctgttctat
accatgctgaccaaaccactggtgcgggtgatcagcgcgctgagcaactccaacccgcac
gcagccaagcccaccaagctggactacccacccggccacgagcacgacgaaatcggcgtg
ctggtgcgcgcggcgaaccagcagttcgtcagcatgagcaccgagatccagcaacggcgc
accgccgaaaaccgcctgaccgagtacctggccgagctggaaaacattgtctcggcgcgc
accactgagctcaaggccagcaacatccgcctgagcctgtccaacgaggaactggaaaac
gcccggcgcacggccctggacatggcacaggcccgtgccgcgttcctggccaacatgagc
catgagatccgtactccgctcaacggcctgctgggcatgatcgccctgtccctggacagc
ccgctgaccgccgaacagcgccagcagctgtccatcgcccatgactcgggcaaagtgctg
gtggaactgctcaacgacattctcgacctgtcgaaattcgacgcgggccaattggagctc
gaacgcattccgttcgaccttggcgcgctggtggaagacaccgccaacctgttgtcacag
aacgctgcgcccagtgtggagttgacgtgcctgatcgcccccaccttcccctccatggtg
ctgggcgaccccacacgcgtgcggcagatcgtcagcaacctgttgtccaacgccctgaag
ttcacccgctttggccgtgtcgatgtgcgcctgagcacctaccccgggggggtcagcatc
gaggtgtgcgacaccggcatcgggattgcccaggaagcccaggtgaagatcttccaaccc
ttcacccaggcaggcgccggcatcacccgccagttcggcggtaccggcctggggctggcg
ctgaccaacaacctctgcgaagccatgcagggccgcctgagcatcagttccgaagcgggt
tttggcagccgcttcagcgccgacctgcccttgctgacccacaccccggccatcgccccg
ccgcccctgaagggcaaggtactggccatcagcccggccagcagcggcctggccgaactg
ctggaaaacctgctgcccggttgggggctggagtaccagcgcctggggaccgacgccccc
ctggaaggcttgaagcccgacctgctgatcaccgactgcctggactgcctgttcggcctg
cgccccgccatcgacgcgccgatattgctggtgaccgcctacggcaacttcctgcccacc
gagcaggctaccgccctgagccccctgcaacagcaagcccgcccgctggcgcgcaacgcc
ctgtaccagacgctcaaacgcaccctgctgggcgacgagccgacccagcagcaagcgctg
gagcgcggcgaagccgcccagcggcgggcgcgcatcctgttggtggaagacaaccccgtc
aaccagctggtggccaagggcatgctcagcaaactggggtgcgaggtcacggtggcggcc
catggcggcgaggcgctggcagcactggaagaccgcgagtacgacctggtgctgatggat
tgcaacatgccggtgatggacggctatgaggccagccgccgcatacgccagagcggccgc
tggccgcaaatgcccatcgtcgccctgaccgccaacgccatgccagaggagcgcgagcgc
tgccgagccgcgggcatgagcgactacctggccaaaccgttccgacgtgaggaactggtc
accctgatcgaccactgggtgccgatcgccccagcaccatga
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