Pseudomonas silvicola: LZ023_15430
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Entry
LZ023_15430 CDS
T10729
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiv03000
]
LZ023_15430
Transcription factors [BR:
psiv03000
]
Prokaryotic type
Helix-turn-helix
Other families
LZ023_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
PAS_4
HTH_50
AAA_5
AAA_2
HTH_23
HTH_30
PAS_5
HVO_A0261_N
HTH_17
TTHA0829-like_ACT
PAS
HTH_20
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WAH60814
LinkDB
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Position
complement(3288840..3290690)
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AA seq
616 aa
AA seq
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MLSAHSKAHVDCVSRVLKNAAQLPQLPVPDLILDSWRRSMEQHHLDPGSLQGPRILSHNV
LRECRERAELFLRIAGEAVARLHGRVRDADYCVLLTDAQGRTIDYKVDSAIANDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSGVPVTVHKRDHFRAAFIGLTCSAAPVYDPQGQLLGVLD
VSAVRSPDERRSQHLIRQLVVQSAKDIEQAFFMNSAQGYWVLRAHHSPGYVDSQPDLLFA
WDDDGCLQALNPAARRYLLHRHGQVPGHISQVFDPALLRRASDQSLCQLHDLHARLSAPR
RTTPRARASLAPVDIDPRIEQNLRLAVRVKDRHLPVLIQGETGAGKEVFARQVHEASQRS
ARPFVAVNCAAIPEGLIESELFGYRPGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLA
LQTRLLRVLAEGEVAPLGASQRKAVDIQVICATHRDLEALVALGSFREDLYFRLGGARFQ
LPPLRERTDRLTLIGRILQEESAGVRLSDAVLERLLGYRWPGNVRQLRHVLRYACAVCEG
DQVLLEHLPEPLTAGDSAQDQHAPTAASPERQALLDALIRHRWKPLPAARALGISRATLY
RRVHQHGIEMPGRSAP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgcacactccaaggcgcatgtggattgcgtcagccgtgtccttaaaaatgct
gcgcagctgccgcagttgccggtccccgacctgattctcgactcgtggcgccggtccatg
gaacagcaccacctggacccaggctccttgcagggcccacgcatcctttcccataacgtg
ctgcgcgaatgccgtgaacgcgccgagctgttcctgcgcatcgccggcgaggcagtggcc
cgcctgcacggccgcgtgcgcgacgccgactactgcgtgctgctcaccgatgcccaaggc
cgtaccatcgactacaaggtggacagtgccattgccaatgactgccgcaaggcggggctg
tacttgggcacctgctggtcggagggcgaggaaggtacctgtggcgtggccgcggtactc
accagcggcgtgccggtgaccgtgcacaagcgcgatcatttccgcgccgcgttcattggc
ctgacctgctcggccgcgccggtctacgacccccaaggccagctgctcggggtgctggac
gtgtcggccgtgcgctcgccggatgagcgccgctcccagcacctgatccgacagctggtg
gtacagagcgccaaggacatcgagcaggcgtttttcatgaacagcgcccagggctattgg
gtattgcgcgcccatcacagcccaggctacgtcgacagccagcccgacctgttgttcgcc
tgggacgatgacggctgcctgcaggcactgaacccggcggcgcggcgctacctgctgcac
cgccatggccaggtgccggggcatatcagccaggtcttcgacccggccttgctgcgccgt
gccagcgaccagtcgctgtgccaactgcacgacctgcatgcgcgcctgagcgcgccccgc
cgtacgaccccgcgcgcccgtgccagcctggctcctgtagacatcgacccgcgcatcgag
cagaacctgcgcttggccgtgcgggtcaaggaccgccatcttcccgtgctgatccagggc
gagaccggcgcaggcaaggaagtgttcgcccgccaggtgcacgaagccagccaacgcagc
gcccgccccttcgtggcggtcaattgcgcagcgatccccgaagggctgatcgaaagcgag
ctgtttggctaccgtcccggtgcctttaccggcgcgtcgagcaaaggcatgcaggggctg
ctgcaacaggccgacggcggcaccctgttcctcgacgaaataggtgacatgccactggct
ttgcaaacccgcctgttgcgggtgctggcagaaggcgaagtggcaccgttgggcgcgtca
cagcgcaaggccgtggacattcaagtgatctgcgccacccaccgcgacctggaggcgctg
gtggcgctgggcagttttcgcgaggacttgtactttcgcctgggcggcgcgcggttccag
ctgccacccctgcgcgagcgcactgatcggttgactctgatcgggcgcatcctgcaggag
gaaagtgctggcgtgcggttgagcgacgccgtgctggagcggctgctggggtaccgctgg
cccggtaacgtgcgacaactgcggcatgtactgcgctatgcctgcgcggtgtgcgagggc
gaccaggtgttgctcgagcacctgcccgaaccgctgacagcgggggacagcgcccaggac
caacacgccccgactgccgccagccctgaacgccaggcactgctggacgcgctgattcgc
caccgctggaagccgctgcccgccgccagggcgctgggaatttcgcgggctacactgtac
cggcgcgtgcatcagcacgggattgaaatgccgggtcgaagcgcgccctaa
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