Pseudomonas silvicola: LZ023_15875
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Entry
LZ023_15875 CDS
T10729
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00071
Fatty acid degradation
psiv00280
Valine, leucine and isoleucine degradation
psiv00310
Lysine degradation
psiv00362
Benzoate degradation
psiv00380
Tryptophan metabolism
psiv00410
beta-Alanine metabolism
psiv00640
Propanoate metabolism
psiv00650
Butanoate metabolism
psiv00907
Pinene, camphor and geraniol degradation
psiv00930
Caprolactam degradation
psiv01100
Metabolic pathways
psiv01110
Biosynthesis of secondary metabolites
psiv01120
Microbial metabolism in diverse environments
psiv01200
Carbon metabolism
psiv01212
Fatty acid metabolism
Module
psiv_M00087
beta-Oxidation
psiv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LZ023_15875 (fadB)
00650 Butanoate metabolism
LZ023_15875 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LZ023_15875 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LZ023_15875 (fadB)
00310 Lysine degradation
LZ023_15875 (fadB)
00380 Tryptophan metabolism
LZ023_15875 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LZ023_15875 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LZ023_15875 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LZ023_15875 (fadB)
00930 Caprolactam degradation
LZ023_15875 (fadB)
Enzymes [BR:
psiv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LZ023_15875 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LZ023_15875 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LZ023_15875 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LZ023_15875 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WAH60895
LinkDB
All DBs
Position
3392233..3394380
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLSELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVAAINGIALGGGLE
MCLAADYRVMAETAKVGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIASGKENRAEDAL
KAGAVDAVVAPEKLKDAALDLIKRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGREKALEVEAAGFVKMAKTSAAQSLVGLFLNDQEL
KRKAKAYDELAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDINEKGIEQGLAEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGHVDIVVEAVVENPKVKQAVLAEVESQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRVDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLEVLKPIVYEQRELTDDDILNWMMIPLCLETVRCLEDGIVATAAEADMGLVY
GIGFPPFRGGALRYIDSLGVANFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaatcgtctgaccctgagcgaactg
cgccaggccgtcgacaccatcaaggccgatgcctcgatcaagggcgtgattgtcagcagt
ggcaaggacgtcttcatcgtcggcgcggacatcaccgaatttgtcgacaacttcaagctg
cccgaggccgaactggtcgccggtaacctggaagccaaccgcattttcagcgacttcgaa
gacctgggcgtgcccaccgtggcggccatcaacggtatcgccctgggcggcggcctggaa
atgtgcctggccgctgactatcgcgtcatggccgagaccgccaaggttggcctgccggaa
gtcaaattgggtatctacccaggcttcggcggtaccgtgcgcctgccgcgcatcatcggt
gccgacaatgccatcgaatggatcgcctcgggcaaggaaaaccgtgccgaagacgccctc
aaggcgggtgcggtagatgccgtggtcgcgcccgagaagttgaaggacgctgccctggac
ctgatcaagcgcgccatcagtggcgagttcgactacaaggccaagcgccagccgaagctg
gacaagctcaagctcaacgccattgaacagatgatggccttcgagacggccaagggcttc
gtcgccggccaggccggcccgaactacccggcgccggtcgaagccatcaagaccatccag
aaagcggccaacttcggtcgtgagaaagccctggaagtcgaagccgccggctttgtgaaa
atggccaagacctcggccgcgcaaagcctggtgggcctgttcctcaatgaccaggaactc
aagcgcaaggccaaggcctacgatgaactggcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcggtcaagggcacgccgatc
ctgatgaaggacatcaacgagaagggcatcgagcaaggcctggccgaagcctcgaagctg
ctgggcaagcgcgtcgagaaaggccgcctgaccccggcgaagatggccgaggcgctgaac
gccattcgcccgaccctgtcgtacggcgatttcggccacgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaagccgtgctggctgaagtggaaagccaagtgaag
gacgacaccatcctggcgtccaacacctcgaccatttccatcagcctcctggccaaggcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgaagtcgcggtggcgactaccgtggcc
tacgccaagaaaatgggcaagaaccctatcgtggtcaacgattgcccgggcttcctggtc
aaccgcgtgctgtttccatacttcggcggctttgcccgcttggtcagtgccggcgtcgac
ttcgtgcgcgtcgacaagatcatggagaaattcggctggcccatgggcccggcctacctg
atggacgtggtcggcatcgacactggccaccacggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaagatgaccgtcgttcggccatcgacgtgctgtacgaggccaaccgc
ctgggccagaagaacggcaaggggttctatgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgccgacgcctcggtgctggaagtgctcaagccgatcgtctacgagcagcgc
gagctgaccgacgacgacatcctcaactggatgatgatccccctgtgcctggaaaccgtg
cgttgcctggaagacggtatcgtcgccaccgcggccgaagccgacatgggcctggtgtac
ggcatcggcttccctcccttccgtggcggtgcattgcgttacatcgattcgctgggcgtg
gccaatttcgtcgccctggcagaccagtacgccgacctgggcccgctgtaccaccccacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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