Pseudomonas silvicola: LZ023_18800
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Entry
LZ023_18800 CDS
T10729
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_18800
Enzymes [BR:
psiv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LZ023_18800
Transfer RNA biogenesis [BR:
psiv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LZ023_18800
Prokaryotic type
LZ023_18800
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WAH55113
LinkDB
All DBs
Position
complement(4040349..4041305)
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AA seq
318 aa
AA seq
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MDLLFLGTSSGVPTKARNVSATAVIEASGKAWYLVDCGEGTQHQLLHSPLSMRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRSEPLELVLPQALHAWVRQSLAVSATHLPFELRLHALE
TLDQWANASMAVSTVALSHRVPSWGYVFAEVNPDPRLDSERLLADGIPRGPLWGELAHGR
DVEHEGRAITASTYLRPSRPGRRIIVCGDNDRPELLAQVAPGADVLVHEATFTQPVLERA
QTSHGHSTAAAVAQFAEAAGVPNLVLTHFSARYQGDPNRSPCIDDVRVEAETRYSGQLVL
AQDLQRYRVGRDGVLVAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgtttctgggtacctcttccggggtgcccaccaaggcccgcaacgtcagc
gccaccgcggtcatcgaagcctccggcaaagcctggtacctggtcgattgcggcgaaggc
acgcagcaccaattgctgcactcgccgctgtcgatgcgcgacctgcgtgccatcttcatc
acccacgtgcacggtgaccactgtttcggcctgccggggttgctggccagcgccggcatg
tccgggcgcagcgaaccgctggagctggtgttgccccaggcgctgcacgcgtgggtgcgc
cagagcctggccgtgagtgcgacccacctgcctttcgaactgcgcctgcacgcactcgaa
accctggaccagtgggccaacgccagcatggcggtgagcaccgtggcgctgtcacatcgg
gtgcccagttggggctatgtgttcgctgaagtcaacccggacccacgcctggacagcgag
cgcctgctggccgacggcatcccccgcggtccgctatggggcgaactggcccacggccgc
gacgtggagcatgaaggccgggcgatcaccgccagcacctacctgcgcccgtcccggccg
gggcggcgcatcatcgtctgtggtgacaacgaccggccagagttgctcgcgcaggtggca
ccaggggctgacgtgctggtgcatgaggccacctttacccaaccggttctggaacgtgct
cagaccagccatgggcatagcaccgcggcggcggtggcccagttcgccgaggccgcgggc
gtgccgaacctggtgctgacgcacttcagtgcacgctaccagggcgacccgaaccgcagc
ccctgcatcgatgatgtgcgtgtagaggctgaaacacgctacagcgggcagttggtgctg
gcgcaggatctgcagcgttaccgtgtggggcgtgacggtgtgctggtggccctctag
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