Pseudomonas silvicola: LZ023_18865
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Entry
LZ023_18865 CDS
T10729
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_18865
Transporters [BR:
psiv02000
]
Other transporters
Pores ion channels [TC:
1
]
LZ023_18865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WAH55126
LinkDB
All DBs
Position
complement(4055303..4057993)
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AA seq
896 aa
AA seq
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MLMSFPRFTLKPLAATLQRHRLVPLYVMAMGMGTVQAADDSSTAAVVAPATTQLQKVEVT
GSAIRRVDAETAVPVTILRAAELEKQGVTTTAELMQRITGNNSIGNSAGSVGAATGGASF
ADMRGIGANKTLVLLNGRRLANNAMSGTDSQGGAVDLNMIPFAAIDRVEVLRDGASALYG
TDAIGGVINFITKKSLTDGTLTLGGENPTNSGGGGSKDMSGSWGYGDLDKDRFNVMGVFN
YRTQQNLDANDRSFDRDYVPGRGLDNTSGTAFPGNYSQNGNAANPLGTACSGANLIASNG
VCRYSTRNSIDLLPQTESTSFFGKATGKLADDHNVNLEYFWSRNNNSTTVAPAPLTGLSL
APSSPYYPGNGITPLPTGFALDPTQPVDVNWRETAAGDRESKDQNTSQRLVLSFDGTVGG
WDYNVGAGYNQNQVYNSVTGGYASDSALTSGLDSGLLNPFGAQSAAGQAYIDANTYHGAY
AVSTGRVASLDGKVTREIGDWFGAGPVGLALGGEYRKEKYHESVADWAGDLSSLGVDPNS
SVSGDRSISAEYAEINVPVIDSLELGAAVRHDKYSDFGSTTNPKYTFRFQPFKELVMRGA
YSEGFRAPSLYELNNPTYTTFTQGNYNDPTLCAGGVVRPGGNGGRDCNQQFLNSTGGNQD
LKPETARNVTLGFVYQPVRNLSMGLDFWWIKIAGQIEEFPESEVFANPELYSDRIVRAAD
GSIDHIVTGLANLGNVKTSGIDVSLDYRFPQTTFGQFGLDLQGTYVTRYDYQQIIGGAYT
DRVGDFQGDQVAQRWKHNITGSWNYDAYRASVTNRFTTGYNDYDPTTHSRVSSYSLWDLS
AGYTFDKVLDLDVGVKNVFDRDPPFSNQAYTFQSGYDPRYTDPLGRTLFARMTYHF
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgagttttccacgttttaccctcaaaccactggcggccaccctgcaacggcat
cgtctggtgcccttgtacgtgatggccatggggatgggcaccgtgcaggctgccgacgac
agcagcaccgccgcggtcgtggcacccgccaccacgcaactgcaaaaggttgaagtgact
ggctcggccattcgccgggtcgacgccgaaacagccgtgccagtgaccattctgcgtgcc
gcggagctcgagaaacagggtgtgaccaccaccgccgagctgatgcagcgcatcaccggc
aacaactcgatcggcaactcggccggctccgtgggcgcagccaccggcggcgccagcttc
gccgacatgcgcggcatcggcgccaacaagacgttggtattgctcaacggccggcgcctg
gccaacaacgccatgtcagggaccgactcccagggcggcgcggtcgacctgaacatgatc
cccttcgccgccatcgaccgcgtcgaagtgttgcgtgacggcgcctcggccctctatggc
accgatgccatcggcggcgtgatcaacttcatcaccaagaaatcgctgaccgatggcacc
ctcaccctcggcggcgaaaaccccaccaacagcggtggtggcggcagcaaggacatgagt
ggcagctggggctacggtgacctggacaaggaccgtttcaacgtcatgggcgtgttcaac
taccgcacccagcaaaacctggatgccaacgaccgcagtttcgaccgggactacgtgccc
ggccgcggcctggacaacacctccggcaccgccttccccggcaactacagccagaacggc
aacgccgccaacccactgggcaccgcgtgcagcggcgccaacctgatcgccagcaacggc
gtgtgccgctacagcacgcgcaactcgatcgacctgctgccccagaccgaatccacgtcg
ttcttcggcaaggcgaccggcaagctggcggacgaccacaacgtcaacctggaatatttc
tggtcgcgcaacaacaacagcaccaccgtcgccccggcccccctgacgggcctcagcctg
gcaccctcctcgccttactaccctggcaacggcattacccccctgcctaccggtttcgcc
ctggaccccacccaaccggtggacgtgaactggcgtgaaacggctgccggcgaccgtgaa
tccaaggaccagaacaccagccagcgcctggtgctgagcttcgatggcaccgtcggcggc
tgggactacaacgtcggcgccggctacaaccagaaccaggtgtacaacagtgtcaccggg
ggctatgccagtgattcggcgctgaccagcgggctggacagcggcctgctcaaccccttc
ggtgcgcaaagcgccgccgggcaggcctacatcgacgccaacacctaccatggcgcctat
gcggtatccacgggccgtgtggcgtcgctggacggcaaggtcacccgcgagatcggtgac
tggttcggtgccggcccggtgggtctggccttgggcggcgagtaccgcaaggagaaatac
cacgagtcggtggccgattgggccggcgacctgtcgagcctgggcgtcgaccccaacagc
tcggtctcgggcgaccgcagcatcagcgccgagtatgccgagatcaacgtaccggtgatc
gacagcctggaactgggcgccgcggttcgccacgacaagtacagcgactttggcagcacc
accaaccccaagtacaccttccgctttcaacccttcaaggaattggtgatgcgcggtgcc
tacagcgaaggcttccgggccccctcgctgtatgaactgaacaaccccacctacaccacg
ttcacccaaggcaactacaacgaccccaccctgtgcgccggcggcgtcgtgcgcccaggc
ggcaacggtggccgcgactgcaaccagcaattcctcaacagcaccggcggcaaccaggac
ctcaagcccgagacggcacgcaacgtcaccctgggcttcgtctaccagcccgtgcgcaac
ctctccatgggcctggatttctggtggatcaagatcgccgggcagatcgaggagtttccc
gagtccgaggtgttcgccaaccctgagctgtacagcgaccgtatcgtgcgcgccgctgac
ggctccatcgatcacatcgtgacgggcctggccaacctgggtaacgtgaaaaccagtggc
atcgacgtcagcctcgactaccgcttcccgcagacaaccttcggccagttcggcctggac
ctgcagggcacgtacgtcacccgctacgattaccagcagatcatcggcggtgcctatacc
gaccgcgtcggcgacttccagggcgaccaggtggcacagcgctggaaacacaacatcacc
ggcagctggaactacgatgcctaccgtgcttcggtgaccaaccgcttcaccaccggctac
aacgactacgaccccaccacccacagccgcgtcagctcgtattcgctgtgggacctgtcg
gccggctacaccttcgacaaggtgctggacctggacgtgggcgtgaagaacgtgttcgac
cgcgacccaccgttctccaaccaggcctacaccttccagagcggctacgacccgcgctac
accgacccgttgggccgaaccctgttcgcgcgcatgacttaccacttctga
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