Pseudomonas silvicola: LZ023_18925
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Entry
LZ023_18925 CDS
T10729
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psiv Pseudomonas silvicola
Pathway
psiv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LZ023_18925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_18925
02044 Secretion system [BR:
psiv02044
]
LZ023_18925
Transporters [BR:
psiv02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LZ023_18925
Secretion system [BR:
psiv02044
]
Type I secretion system
Adhesin protein transporter
LZ023_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
RsgA_GTPase
AAA_23
AAA_29
MMR_HSR1
FtsK_SpoIIIE
AAA_25
AAA_30
AAA_22
Dynamin_N
NACHT
DUF87
TsaE
Motif
Other DBs
NCBI-ProteinID:
WAH55138
LinkDB
All DBs
Position
complement(4072179..4074338)
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AA seq
719 aa
AA seq
DB search
MTDATVIPHDPAGAAPKADYAPWLEAVLTVARHYRLDVSPESIRLASLQPDGRLEDVVRH
MARQAGLSVKFAGFDRRSLSRWRAPLVVQLRDGQVGVVESVGEDGELGVVFSGDQGLQSR
LAPATLAGEAIRTVVLRPTRALSDVRTDDYVKPFDEHWFRRIVLRDLRPYTHVMIASLVA
NLLGLAGVLFSMQVYDRVIPAESLPTLYVLFGGVLLSVVFDFVMRIARLRITDLLGKRAD
LRVSDLVFGHALRLRNSARPRSTGSFISQLRELEQIRDLITSSTATALADLPFFLLFLLV
FYLIGGALVAIPVVALVAMVLPGILAQRKLARLANESMREAALRNAMLVESIQGLDDIKA
LQAEQRFQQQWNQYNAASAQSSLRLRNLTNSLVAWTQNVQSAVFAVVIVFGAPMVIAGDL
TTGSLVAASILSSRMMAPMAQLTHVLTRWQQAKVALEGLNRIMQLPVDHPEGSQRVHLPA
IRGDYQFKQASFRYSEEAAPALSALNLTIRPGEHIAVLGRNGAGKSTLLQALAGAMDLST
GETTLDGIALPHLDPADLRRDVGLMAQHARLFHGTLRDNITLGAGQASDQEILAALSLTG
ALDFVRLLPKGMDHLILEGGQGLSGGQRQSLLLSRLLLRQPQVLLLDEPTASLDDITERR
LLEQLATWTQGRTLVVATHRVSLLQLVERIIVLDGGRIVIDDHRDAALARLKQPQGAQA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccaccgtcatcccccacgacccggccggcgccgcccccaaggccgactac
gcgccgtggcttgaagccgtgctcaccgtggcccgccactaccgcctggacgtgtcgccg
gaaagcatccgcctcgcctccctgcaaccggacgggcgcctggaagacgtggttcggcac
atggcccgccaggccgggctgagcgtcaagttcgccggtttcgaccggcgcagcctcagc
cgctggcgcgcgccgctggtggtgcagttgcgcgacggccaggtgggcgtggtggaaagc
gtgggcgaggacggcgaactgggcgtggtgttcagcggcgaccagggcctgcaaagccgc
ttggccccggccaccctggcgggcgaagcgatccgtaccgtggtgctgcgccccacccgg
gccctgagcgacgtgcgcaccgacgactacgtcaagcccttcgacgaacactggttccgc
cgcatcgtgctgcgcgacctgcgcccctacacccacgtgatgatcgcctcgctggtggcc
aacctgctgggcctggccggggtgctgttttccatgcaggtgtacgaccgggtgatcccg
gccgaatccttgcccaccctgtacgtgctgttcggtggcgtgctgctgtcggtggtgttc
gatttcgtcatgcgcatcgcgcgtttgcgcatcactgacctgctgggcaagcgcgccgac
ctgcgggtgtccgacctggtgttcgggcacgccttgcgcctgcgcaattcggcacgcccg
cgctcgaccggctcgttcatttcgcagttgcgcgagctggaacaaattcgcgacctgatc
acctccagcaccgccacggcgctggccgacctgccgttcttcctgctgttcctgctggtg
ttctacctgatcggtggcgccctggtggccatccccgtggtcgccctggtggcgatggta
ttgcccggtatcctggcgcaacgcaaactggcgcgcctggccaacgagtccatgcgcgag
gccgccttgcgcaacgccatgctggtggaaagcatccagggcctggacgacatcaaggcg
ctgcaggccgagcaacgcttccagcaacagtggaaccagtacaacgcagcctccgcgcaa
agcagcctgcgcctgcgcaacctcaccaacagcctggtggcctggacccagaacgtgcag
agcgcggtgttcgcggtggtgatcgtgttcggcgcacccatggtcatcgccggcgacctg
accaccggcagcctggtggcggcgtcgatcctgtcgtcgcggatgatggcgcccatggcg
caactgacccacgtgctgacccgctggcagcaggccaaggtggcgctggaaggcttgaac
cgcatcatgcagttgccggtggaccaccccgaaggcagccagcgggtgcacctgccggcc
attcgtggcgactatcagttcaagcaggccagcttccgctacagcgaagaggccgcgccg
gccctcagtgccctgaacctgaccatccgcccgggcgaacacatcgccgtgctgggccgc
aatggcgccggcaagtccaccctgctgcaagcgttggccggggccatggacctgagcacc
ggcgagaccaccctggacggcattgccctgccccacctggaccccgccgacctgcgccgc
gacgtgggcctgatggcccagcacgcgcggttgtttcacggcaccctgcgcgacaacatc
accctgggcgccggccaggccagcgaccaggagatcctcgcggcgctgtcgctgaccggt
gccctggatttcgtgcgcctgctgcccaagggcatggaccacctcatcctggaaggcggt
cagggcctgtccggcggccagcgccagagcctgctgctgtcgcgcctgctgctgcgccag
ccccaggtactgttactggacgagcccaccgccagcctcgatgacatcaccgaacggcgc
ctgttggaacaactggccacctggacccagggccgcaccctggtggtagccacccaccgg
gtcagcctgctgcaactggtggagcggatcatcgtgctcgacggtggccgcatcgtcatc
gatgaccaccgcgacgccgcgctcgcgcgcctcaagcaaccccaaggagcccaggcatga
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