Pseudomonas silvicola: LZ023_20435
Help
Entry
LZ023_20435 CDS
T10729
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00071
Fatty acid degradation
psiv00280
Valine, leucine and isoleucine degradation
psiv00310
Lysine degradation
psiv00362
Benzoate degradation
psiv00380
Tryptophan metabolism
psiv00410
beta-Alanine metabolism
psiv00640
Propanoate metabolism
psiv00650
Butanoate metabolism
psiv00907
Pinene, camphor and geraniol degradation
psiv00930
Caprolactam degradation
psiv01100
Metabolic pathways
psiv01110
Biosynthesis of secondary metabolites
psiv01120
Microbial metabolism in diverse environments
psiv01200
Carbon metabolism
psiv01212
Fatty acid metabolism
Module
psiv_M00087
beta-Oxidation
psiv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LZ023_20435 (fadB)
00650 Butanoate metabolism
LZ023_20435 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LZ023_20435 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LZ023_20435 (fadB)
00310 Lysine degradation
LZ023_20435 (fadB)
00380 Tryptophan metabolism
LZ023_20435 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LZ023_20435 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LZ023_20435 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LZ023_20435 (fadB)
00930 Caprolactam degradation
LZ023_20435 (fadB)
Enzymes [BR:
psiv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LZ023_20435 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LZ023_20435 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LZ023_20435 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LZ023_20435 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WAH55417
LinkDB
All DBs
Position
complement(4434174..4436303)
Genome browser
AA seq
709 aa
AA seq
DB search
MYHGKTLYLKALDDHLAELCFDRQGDVFNKFDITTVNELSDAITVLEHTAGLRGVLISSA
KDAFVVGADIFEFTELFVRSEAELAAHNLGQSRVFSRLAALPVPLVCEINGLALGGGFEV
SLACDYRVVGDNAKVGLPEIGLGFFPGLGGMARLPRLVGAQTTIDWVLSGKAQDASAALL
HGAVDRVVSASHLHDAALELLREAAGNTHGWQDSRQRRVGGFALLDEQVEAALAEAARLH
PHVPAAGAAIRLLQSTAAIGLADALLAENRAFAAIAQTQAAHALMQLFVNDQLLRRKARN
YSRSSRPVTRAAVLGAGIMGGGIAYTSAAKGIGVLMKDITPNALELGMGEASKLLDRQVT
SGRLSQDKADHILAAITPTLSYTGFNTVEVVVEAVVESLSIKQTVLAAVEQVVGTDTVLA
SNTSSLSIGEIGRALERPENFVGMHFFNPVPLMPLVEVIRGPRTSDAAAATIAGYASSMG
KTAIVVQDCPGFLVNRILTANVLGFLRLVHDGADFRQVDAELEAFGWPMGPAYLQDVIGM
DTSEHVIDFISAGYQARMAPEYQHAVKHMVANGRLGQKNGKGFYLHERDERGRLHKRIDP
DVTPLLAKIQANGPRAFSPEEMVDRVMLPMVIEAIHCLEQSVAESAVEIDMALVLGLGFP
RHVGGPLKYADWLGPHVLLERCEQYAHLGPLYAPTAQMRERAITGARYY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacggaaaaactctctaccttaaggctctggacgaccacctcgcagagctgtgc
ttcgaccgtcaaggggatgtcttcaacaagttcgacatcactacggtgaatgagctgtcc
gatgcaatcacagtattggagcacacagcaggcctgcgtggggtgctgatcagcagtgcc
aaggacgcgttcgtggtaggggcagatatcttcgagttcaccgagcttttcgtccgttcg
gaagccgagcttgccgcgcacaatcttgggcagagccgggtattttcccgattggctgcc
ctgccggtaccgttggtgtgtgagatcaatggactagcgctaggcgggggctttgaagtc
agcctggcgtgcgattaccgggtggttggcgacaatgccaaggtcggacttccagaaatc
gggctgggattcttccccggcctgggcggtatggcgcggctccctcgtcttgttggtgca
cagacaactatcgattgggtactgagcggcaaggcgcaggacgccagtgccgccctgctg
catggcgcagttgatcgtgtggtcagtgcatcccacttgcacgacgcggcactggagttg
ctgcgcgaggccgcagggaacacgcatggctggcaggatagccggcagcgtcgcgttgga
ggatttgctctcctcgacgaacaagtcgaagctgccctggctgaggccgctcgcctacac
ccccacgtaccagccgcaggcgccgctatccgtttgttgcaatctaccgcagctattggc
ctggccgatgcattgttggcagagaaccgtgcttttgccgccattgcacagactcaagcg
gcccatgccctgatgcagttgttcgtcaacgatcaactactacgtcgcaaggcccgaaat
tactccaggagcagccgcccggtcacccgtgccgccgtgctgggtgcaggcatcatgggc
ggtgggatcgcttataccagcgctgccaagggtatcggggtgctgatgaaggacatcaca
cccaacgcccttgagctaggcatgggcgaggccagtaagcttttggatcggcaagtcacc
tccggacgcctatcccaggacaaagccgaccatattctggccgccatcacccctaccctg
tcctataccggattcaataccgtggaagttgtggtggaagcagttgtcgaaagcctcagc
atcaaacagaccgtcctggcagccgtggagcaggtcgtggggaccgacaccgtcctcgcc
tcgaacacctcttcactgtccatcggcgaaatcgggcgggcgctggaacgtccggaaaac
tttgtcggcatgcattttttcaatccggtcccgctcatgcccttggttgaagtcatacgc
gggccccgcaccagtgatgccgcggccgcaaccatagccggctacgccagctccatgggc
aagacggccatcgtggtccaggactgccccggttttttggtcaaccgaattctgactgca
aatgttctgggcttcttgcgcctggttcatgacggtgcggacttccgacaggtcgacgca
gaacttgaagcgtttggctggccaatgggaccggcatatttgcaagatgtgatcggcatg
gatacctccgaacatgttatcgacttcattagcgccgggtaccaggcccgcatggcacct
gagtatcagcatgcggtgaaacacatggtagctaacgggcggctcggccagaaaaacggc
aagggtttctaccttcacgaacgggacgagcgtggccgcctgcacaaacgcatagatcct
gatgtgacgccactgctggccaaaatccaagcgaacggcccacgcgccttcagtcccgag
gagatggtggaccgcgtgatgttgcccatggtgatagaggccatccattgcttggagcaa
agcgttgccgaatcggccgtcgagatcgatatggcgttggtgctggggctcggcttcccc
cgccacgtcggcggcccactcaaatacgccgactggcttggcccccacgtcttgctcgaa
cgctgcgaacagtacgctcacttggggccgctttacgcgcctaccgcgcaaatgcgtgaa
agagctataaccggcgctcggtactactga
DBGET
integrated database retrieval system
