Pseudomonas silvicola: LZ023_21130
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Entry
LZ023_21130 CDS
T10729
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03420
Nucleotide excision repair
Brite
Enzymes [BR:
psiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LZ023_21130
Transcription machinery [BR:
psiv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LZ023_21130
Chromosome and associated proteins [BR:
psiv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LZ023_21130
DNA repair and recombination proteins [BR:
psiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LZ023_21130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WAH55539
LinkDB
All DBs
Position
4585332..4587584
Genome browser
AA seq
750 aa
AA seq
DB search
MSYRVAVRALCEFTAKVGDLDLRFTPSPTAQEGMAGHRRVTAGRGAGYQSEVALEGTYQS
LQVRGRADGYDPARNRLEEIKTHRGDLERQPANHRQLHWAQARVYGWLLCQRDGLAQLNL
ALVYLDVDSDRQTLIEEQWQASDLEAYFHQQCALFLAWAEAEMQRAGVRDQALVALKFPH
GEFRLGQRDLAETVYKAVSTGRCLMAQATTGIGKTLGTLFPMLKALVPQQLDKVLFLTAK
TPGRQLALEALRQIGASAPDLPLRSLELVARDKACEYPDKACHGDSCPLAKGFYDRLPAA
RAAAVQLRLQDQQAVREVALAHQVCPYYLSQELARWADVVVGDYNYYFDLNALLFGLAQA
NQWRLALLVDEAHNLVERTRGMYSASLDQYYLGVLRRDPPALLKSPLQKLNREWNALYKD
QLGPYQACAHLPDRFVQALLRCVSALGELFNEQPTGLDRAWLDFYFDALQFTRVAELYGE
HYVFDIQQREGAGRKRQAQLNLRNVVPAPLSGPRLKAARSAVLFSATLSPQHYFADLLGL
PADCAWIDVQSPFSAAQLDVRIVDSISTRFNHRRASLAPIAALIAEQFARQPGNYLAFFS
SFDYLQQVAEVMAAQYPDVPLWLQGRKMDEAQRRDFLGQFSDHSQGVGFAVLGGAFGEGI
DLPGKRLIGAFIATLGLAQFNPVNEQLKARMGEVFGAGYDYTYLYPGLHKVVQAAGRVIR
GQQDQGVVVLIDDRFSEGRVKALLPRWWAV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccgcgtggcggtacgggccctgtgcgagttcaccgccaaggtcggcgacctg
gacctgcgcttcacgccctcgccgacggcccaggaggggatggccgggcaccggcgcgtc
acggctgggcgcggcgccggttaccagagcgaagtggcgctggaaggtacctatcaatcc
ttgcaggtgcgcggccgtgccgatggctatgacccggcgcgcaaccgcctggaagaaatc
aagacccaccgtggcgacctggagcgccagccggccaaccatcggcagttgcactgggcg
caggcgcgggtatacggctggctgctgtgccagcgcgacgggctggcgcagctcaacctg
gcgctggtgtacctggacgtcgacagcgaccgccagaccttgatcgaagagcagtggcag
gccagcgacctggaggcgtatttccaccagcagtgcgccctgttcctggcctgggccgag
gctgaaatgcagcgtgccggcgtgcgtgaccaggcgctggtggcgttgaagtttccccat
ggcgagtttcgcctgggccagcgcgacctggcggaaaccgtctacaaggcggtcagcacc
ggccgttgcctgatggctcaggccactaccggtatcggcaagaccctgggcaccctgttt
cccatgctcaaggccctggtgcctcagcaattggacaaggtgctgttcctcaccgccaag
accccaggccggcaactggccctggaggccttgcgccagatcggcgccagtgcgcctgac
ctgccattgcgcagcctggaactggtggcccgggacaaggcctgcgaatacccggacaag
gcctgccacggtgattcgtgcccgctggccaagggcttttacgaccggctgccggcggcc
cgcgccgcagcggtgcaactgcgcctgcaagaccagcaggcggtgcgcgaagtcgccctg
gcccaccaggtgtgcccctattacctgagccaggaactggcccgctgggccgatgtggtg
gtgggcgattacaactactatttcgacctcaacgccttgctgtttggtctggcccaggcc
aaccagtggcgcctggcgctgttggtcgacgaggcgcacaaccttgtggagcgaacccgc
ggcatgtacagcgccagcctcgaccagtactacctgggcgtgctgcgccgcgacccgccc
gcgctgctgaaaagccccttgcaaaagctcaaccgcgaatggaatgctctgtacaaggac
cagctggggccctatcaggcctgtgcgcacctgccggaccgcttcgtgcaagccttgctg
cgctgtgtcagtgccttgggcgaactgttcaacgagcagcccaccgggctggatcgtgcc
tggctggacttctatttcgatgccctgcaattcacccgggtggccgaactgtatggcgag
cactatgtgttcgatatccagcagcgcgagggcgcagggcgcaagcgccaggcgcagttg
aacttgcgtaacgtggtcccggcgcctctgagcggcccgcgcctgaaagcggcccgcagt
gcggtgctgttctccgcgaccctcagcccgcagcattatttcgccgacctgctgggcttg
ccggcggactgcgcctggatcgacgtgcagtcacccttcagcgcggcgcaattggacgtg
cgcatcgtcgacagtatttcgacccgcttcaatcaccggcgtgcctccctggcgcccatc
gccgcgttgatcgccgagcagtttgcccgccagcccggcaactacctggcgttcttcagc
agtttcgattatctgcaacaggtggcggaggtcatggccgcccagtatcccgacgtgccg
ttgtggctgcaggggcgcaagatggacgaggcccagcgccgggactttctcggccagttc
agtgaccacagccagggcgtgggcttcgccgtgctgggtggagcgtttggcgagggcatc
gacctgcctggcaagcgcctgatcggcgcgttcatcgccaccttgggcctggcgcagttc
aacccggtcaacgaacagctcaaggcgcgcatgggcgaagtgttcggcgccggttacgac
tacacctacttgtatcccgggttgcacaaagtggtgcaggcggcgggcagggtgatccgc
ggccagcaggaccagggcgtggtggtgctgattgatgaccgtttcagcgaagggcgggtg
aaagcgttgctgccgcggtggtgggcggtctga
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