Pseudomonas silvicola: LZ023_22110
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Entry
LZ023_22110 CDS
T10729
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiv03009
]
LZ023_22110
Ribosome biogenesis [BR:
psiv03009
]
Prokaryotic type
ribosomal protein modification factors
LZ023_22110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
WAH55723
LinkDB
All DBs
Position
4824901..4827105
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AA seq
734 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
GPEFIIEEVENLDADAQALLMLNADSQASTFIAGKDLPLEQTITNLSSILAGLGMKIEIA
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAPFVHYPDERWFKPGRKDALPKDILDEYCLAIYNPDGELRGSHLIDTNSGNEERGIC
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPRFEVALERSLTELLQGRSFEGLNDLPQPTFESQALMEPNNFVEHFIDSSGVVSWRF
FSARSNFEFVEWDFSGKGENSNAEEVETLMGILEGLGKEVYMAVYDQLGATGCRILVPDY
SEIYPVDDLIWDNTNKALFFREDILNLHSLDDDELQALVERLEESELDEYTDITTLIGIE
FDDNTAWGQLTVLELKLLIHLALKHYDEAKELVEMFLQYNDNTVERGLFYQALNVALEVE
LDSDLDMADYEVNFRRMFGDLRMDAVLGSLDGSVRFHGLTPTSMKLEGLERHQRLIDSYK
KLHAARARAAGLTG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctccggcttgaagccaagttcgatgacttc
acggtggtggccgaccagcctatccgctataaaggcgatggctctgcaccggggccattt
gattacttcctggcatcgtcggcactgtgcgcggcttacttcgtgaagttgtactgcgag
acccgcaatatcccaaccgataatatccgcttgtcgcagaacaatattgtcgacccggaa
aatcgttataaccagattttcaagattcaagtggagttgccggcggatatttctgccaag
gaccgtcagggtatcttgcgttccatcgaccgttgcaccgtgaagaaagtcgtgcagacc
gggcccgagttcattatcgaggaagttgaaaacctcgatgccgatgcccaggccttgttg
atgctgaatgccgattcccaggccagcaccttcatcgccggcaaggacctgcccctggag
cagaccatcaccaacctgtcgagcattctggccgggttgggcatgaagatcgagatcgcc
tcgtggcgcaatatcgtccccaacgtgtggtcgttgcacatccgcgacgcacagtcgccg
atgtgcttcaccaacggcaagggcgccacgaaggagggcgcgctggcctcggccctgggc
gagttcatcgagcgcctcaactgcaacttcttctacaacgatcagttctggggcgaggac
atcgccaacgcgccattcgtgcactaccccgacgagcgctggttcaagcctggccgcaag
gatgccttgcccaaggacattctcgacgagtactgcctggctatctacaaccccgacggc
gagctgcgtggctcgcacctcatcgacaccaactcgggcaacgaagaacgtggcatctgc
tcgctgccgttcgtgcgccagtcggacggcgaggtggtgtacttcccctccaacctgatc
gagaacctgtacctgagcaatggcatgagcgccggcaacaccctggccgaagcgcaggtg
cagtgcctgtcggagattttcgagcgcgcggtgaagcgtgagattctcgagggcgagatc
accctgccggatgtgccccaggaggtgttggccaagtaccccggtattctcgccggcatc
cagggcctggaagagcagggctttccggtgttggtcaaggatgcatcgctgggcggtgaa
ttccccgtgatgtgcgtgaccctgatgaacccgcgcaccggcggtgtgttcgcttcgttc
ggcgcccacccacgctttgaagtggcgctggagcgcagcctcaccgaactgctgcaaggc
cgcagtttcgagggcctgaacgacctgccgcagccgaccttcgaaagccaggccttgatg
gagccgaacaacttcgtcgagcacttcatcgattccagcggtgtggtgtcgtggcgtttc
ttcagcgccaggtcgaacttcgaattcgtggagtgggatttctccggcaaaggcgaaaac
tccaacgccgaggaagtcgagacgctgatgggcatcctcgaaggcttgggcaaggaagtc
tacatggcggtctacgatcagttgggcgccacgggctgccgaattctggtgccggactat
tcggagatctacccggtcgacgacctgatctgggacaacaccaacaaggcgctgttcttc
cgtgaagacatcctcaacctgcacagcctggacgatgatgagctgcaggcgttggtcgag
cgcctggaagaaagcgagctggacgagtacaccgatatcactacgctgatcggtatcgag
ttcgacgacaacaccgcgtgggggcagttgaccgtcctggagttgaagctgctgatccac
ctggcgctcaagcattacgatgaagccaaggagctggtggaaatgttcctgcagtacaac
gacaacacggtggagcgaggcctgttctaccaggccttgaacgtggcgctggaagtggaa
ctggacagcgacctggacatggccgattacgaagtcaacttccgccgcatgttcggtgac
ttgcgcatggatgcggtactgggttcgttggacggtagcgttcgcttccacggcttgacg
cccaccagcatgaagctggaagggttggagcgccaccagcgcttgatcgacagctacaag
aagctgcacgcggcgcgtgcgcgggctgctggcctgacaggctga
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