Pseudomonas silvicola: LZ023_22175
Help
Entry
LZ023_22175 CDS
T10729
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_22175
Transporters [BR:
psiv02000
]
Other transporters
Pores ion channels [TC:
1
]
LZ023_22175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WAH55735
LinkDB
All DBs
Position
complement(4840622..4842658)
Genome browser
AA seq
678 aa
AA seq
DB search
MHRFSRTPLPLRFSPLAAALFVSAPSHALELQPQVITANPLGNAQLAAPSTVLEGDTLTL
AQKGSLGETLNGQPGVSSSYFGPGASRPIIRGQDGDRIRLLQNGVGALDASSLSYDHAVP
LDPVNVERVEIVRGPAALLYGGSAIGGVVNTLDNRIPTEAIEGIHGAGELRYGGADTTRS
SAGKLEAGDGTFALHLDANARTFNDVRIPGYAHSASVRATEDADDNGGKHRLANSDGRQD
GGAIGGSYTWDHGYAGLSYSTYDANYGSPAEDDVRIRMQQEHYGFASQIRDLDGPFTSVK
VNAGYTDYKHSEIEDGEVGTTFKNKGYEARVEGRHQPLGPLEGVIGAQVNRSQFQALGEE
AFVPQTDTDAAALFILEDWQATERLKLSLGGRLEHTRVSPDAQGNERFEAADKNSDFTAG
SLSSGVVYSLTPVWSLAATLAYTERAPTFYELYANGAHVATGTYEVGDASLSKEKAVSSD
LALRFDNGVHRGSVGVFYSHFSNYIGLLGTGRTLNDEGEADAGGIPEYTYSGVRARFAGV
EAQDHWALGENAYGKWALELSGDYTRATNLDNGEALPRIAPLRLNSGLLWEKDAWQARVD
VQHASAQHRVPDNESGTDGYTTLGASAGYRFKVGQSQWLAFVKGENLTNQTVRYASSILR
DIAPAPGRSIEVGLRTTF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttttcccgtacccccctgcccctgcgcttcagcccactcgccgctgccctg
ttcgtctccgctcccagtcatgcgcttgagctgcaaccgcaggtcatcaccgccaacccc
ctgggcaatgctcagctcgctgcgcccagcaccgtgctggagggcgacaccctgaccctg
gcgcaaaagggcagcctgggtgaaacccttaatggccagcctggcgtgtcgtcctcctac
ttcggccccggcgccagccggccgatcattcgagggcaggatggcgaccgcatccgcctg
ctgcaaaacggcgtcggcgccctggatgcctcgtcactgtcctatgaccatgccgtgccg
ctggacccggtcaacgtcgagcgtgtggaaattgttcgaggcccggcggcgttgctgtac
ggcggcagcgccatcggcggtgtggtcaacaccctcgacaaccgcattcccaccgaagcc
atcgagggtatccatggcgccggtgaactgcgctacgggggcgccgacaccacgcgcagc
agcgctggcaaactggaagccggcgatggcaccttcgccctgcacctggacgccaatgct
cgtactttcaacgacgtgcgcatccccggctacgcccacagcgccagtgtgcgggccacg
gaagacgccgacgacaatggcggcaagcaccgactggccaacagcgacggccgccaggac
ggtggcgccatcggcggttcctatacctgggaccatggctatgcaggcctgtcctacagc
acctacgacgccaactacggatcgcccgccgaggacgacgtgcgcatccgcatgcagcag
gagcactacgggtttgcttcgcagatccgcgacctcgatgggccgttcacctccgtcaag
gtcaacgctggctacaccgactacaagcacagcgagatcgaggacggagaggttggcacc
acgttcaagaacaagggctacgaggcccgtgtcgagggccgccatcagcccctgggcccg
ttggaaggcgtgattggcgcccaggtcaaccgcagccagttccaggcgctgggcgaagag
gcgttcgtgccccagaccgataccgacgcggccgctctgttcatcctcgaagactggcaa
gccaccgaacgcctcaagctcagcctgggtgggcggctggaacatacccgcgtgtccccc
gatgcccagggcaacgaacgctttgaagcggccgacaaaaacagcgacttcaccgccggc
agcctgtcttcgggggtggtgtacagcctgacgccggtgtggtcgctggccgccaccctg
gcctacaccgaacgcgcgccgaccttctacgagctgtatgccaatggcgcgcacgtggcc
accggcacctacgaggtgggcgacgccagcctgtccaaggaaaaggcggtgtccagtgac
ctggcgctgcgtttcgacaacggtgtgcaccgcggcagcgtcggggtgttctacagccac
ttctccaattacatcggcctgctgggcaccgggcgcacgctcaacgacgagggtgaggca
gacgccggcggcattcccgaatacacctactcgggggtgcgcgcgcgcttcgccggcgtc
gaggcccaggaccattgggcccttggcgagaatgcctacggcaagtgggccctggaactg
tcgggtgactacacccgcgccacgaacctggataacggcgaagccctgccgcgtatcgcc
ccgctgcgcctgaacagcggcctgctgtgggaaaaggacgcgtggcaggcgcgcgtggac
gtgcagcacgctagcgcccagcaccgcgtgcccgataacgagtccggcaccgatggctac
accaccctgggtgcaagcgctggctaccggttcaaggtgggtcagagccagtggctggcc
ttcgtcaagggcgagaacctgacgaaccagacggtacgctacgccagctccatcctgcgc
gatatcgccccggcaccgggacgcagtatcgaagtgggcctgcgtacgaccttctga
DBGET
integrated database retrieval system
