Pseudomonas silvicola: LZ023_22670
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Entry
LZ023_22670 CDS
T10729
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
psiv Pseudomonas silvicola
Pathway
psiv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZ023_22670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_22670
Transporters [BR:
psiv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LZ023_22670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_29
AAA_22
AAA_25
nSTAND3
AAA_16
DUF87
RsgA_GTPase
AAA_23
CbiA
NACHT
FtsK_SpoIIIE
AAA_33
DO-GTPase2
PRK
Motif
Other DBs
NCBI-ProteinID:
WAH55831
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Position
4957894..4959504
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AA seq
536 aa
AA seq
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MSVQATPLLQVSNLHIDYHSAQGDVPGVTGMSFELHAGEVLAIVGESGSGKSTTAAALVG
LLAESARVRGGSIRLDGRELLGLGERQWQQVRGVRIGFVPQDPGLSLDPVKRVGAQLVEA
MTVHGLPRAVARDRSLGLLREVGLPAVEQLARRYPHELSGGMRQRVLVAMGLANRPALVI
ADEPTSALDVNVQRQVLDCLQGLAQERQAAVILITHDLDVALQRADRVLVMHRGRVVESG
AAAQVLRQPRHAYTRALLAAAPSAQAACVRQRSPAHWARAPILQVSGLHKSFATWRQPGP
PAVDDVSFQVPRGGTTSLVGASGSGKSTTARLLLGLERADGGSVRFNGRELLGASRRDWR
ELRRQIQVVYQNPYASLNPRLSLAQIISEPLQAFAVGTAATRRQRVADLLAQVHVPATLI
DNRPDSLSGGQRQRVAIARALALEPELVVLDEPLSALDVLVQQQILELLDELQQRLGLSY
LFISHDLAVVRRISDRVVVMQGGRVVEQGVCEEVFSRPVHGFTQGLLGAAVGVPQL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtccaggccacgccgttgctgcaggtcagcaacctgcacatcgactatcacagt
gcccagggtgatgtgcccggggtgaccggcatgagtttcgaactgcacgccggcgaggtg
ctcgcgatcgttggcgagtcgggttccggcaagtccaccaccgcggcagccctggtcggc
ctgctggccgagagtgcccgggtccgtggcggcagcattcgcctcgatgggcgcgagctg
ctgggcctgggtgagcggcaatggcagcaggtgcgcggcgtgcggatcggcttcgtgccc
caggacccgggcctgtcccttgacccggtgaaacgcgtcggcgcgcaactggtcgaggcc
atgaccgtgcacggcctgccacgtgccgttgcccgggaccggagcctggggttgctacgc
gaagtggggctgcccgctgtcgagcaactggcgcggcgctacccccacgaactgtccggc
ggcatgcgccagcgggtgctggtggccatgggcctagccaaccgcccggcactggtcatc
gccgatgagcctaccagcgcgctggatgtcaatgtgcagcgccaggtgcttgattgcctg
caggggctggcccaggagcgacaggcggcagtgatcctgattacccatgacctggacgtg
gccttgcagcgggccgaccgggtgttggtgatgcaccgcgggcgtgttgtcgagagcggc
gcggcggcgcaggtgctgcgccagccgcggcacgcgtacacgcgggcgctgctggccgcg
gcccccagtgcccaggcggcctgtgtgcgccagcgctcaccggcgcactgggcgcgggcc
ccgatactgcaggtcagtggcctgcacaaaagttttgcaacctggcgccaacccgggccg
cctgccgtggacgacgtgtcgttccaggtgccccgtggggggaccaccagcctggtgggg
gcctcgggttcgggcaagtcgaccaccgcgcggctgttgctgggcctggaacgcgccgat
gggggctcggtgcggttcaatggccgtgaactgctgggtgcttcgcggcgcgactggcgc
gaactgcggcggcagatccaggtggtgtaccagaacccctacgcgtcgctgaacccgcgc
ctgagcctggcgcagatcatcagcgagcccctgcaagcctttgccgtgggcaccgcggcc
acgcgccggcaacgggtagcggacttgctcgcccaagtgcatgtccctgccaccctgatc
gacaaccgccctgacagcctctcgggcggtcagcgccagcgcgtggccatcgcccgcgcc
ctggccctggagccggaactggtggtgctggacgagccgctgtcggccctggacgtgctg
gtgcagcagcagattcttgaactgctggatgaattgcagcagcggctggggttgagttac
ctgttcatttcccatgacctggccgtggtacggcgcatctccgaccgcgtggtggtgatg
caggggggcagggtagtggagcagggggtgtgcgaggaggtattcagccggccggtgcat
gggttcacgcaggggctgctgggggccgcggtaggcgtgccgcagctgtag
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