Pseudomonas silvicola: LZ023_22860
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Entry
LZ023_22860 CDS
T10729
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psiv Pseudomonas silvicola
Pathway
psiv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZ023_22860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiv03021
]
LZ023_22860
Transcription machinery [BR:
psiv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LZ023_22860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
HTH_28
HTH_24
HTH_31
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WAH55865
LinkDB
All DBs
Position
4996357..4996851
Genome browser
AA seq
164 aa
AA seq
DB search
MSRHLLLASLFKDHYTWLRSRAARAMGCHFSGEDIAAETFLRVLGLPDLSAVREPRALLT
TIAKRLMVDTWRRGDLERAYLASLQDEPANSVPTPDERAELVEMLLRLDQLLDGLPGLGK
AVFVHSYLGGLTYVEIGQQLGISKSRVQQYMEQALAQCLLVLVP
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatctgctgctcgcttcgctgttcaaggaccactacacctggctgcgcagt
cgcgcggccagggccatgggttgccatttcagtggcgaggacatcgccgccgaaaccttt
ctgcgggtgctggggctgccggacctgagcgcggtgcgtgagccgcgtgccttgctgacc
acgatcgccaaacgcctgatggtggacacctggcggcgtggcgacctggagcgcgcttac
ctggcctcgttgcaggatgaaccggccaacagtgtgccaacccctgacgagcgcgccgaa
ctggtggagatgctgctacgcctggaccaactgctcgatggcttgcccgggcttggaaag
gctgtgttcgtgcacagctacctcggcggtttgacctacgtcgagatcggccagcaactg
ggtatttccaagagccgcgtgcagcagtacatggagcaggcgctggcgcagtgcctgctg
gtgctggtgccatga
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integrated database retrieval system
