Pseudomonas silvicola: LZ023_22870
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Entry
LZ023_22870 CDS
T10729
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_22870
Transporters [BR:
psiv02000
]
Other transporters
Pores ion channels [TC:
1
]
LZ023_22870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WAH55867
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Position
4997895..5000453
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AA seq
852 aa
AA seq
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MTQPRRLSLPLNHLVLAMALAACSSVPMAAMADQTVGKRHHYNIAPGPLGSVLLSISRQS
GQLIAFDATTVQGRLAPAISGDLDVDQALGRALQGSGLVAEHDANGTVSLVPAKTAAATP
EKALQTVTVTARRREENAQDVPTAITSLSGNALEAQRIYRIQDIQQLVPSTTVAYVHPRQ
SSIAVRGLGNNAASDGLEGSVGVYLDNVYLSRPGMAAFDLLDIDQIDVLRGPQGTLFGKN
TTAGVVNVTTRPPTFTPERTVEMSTGSRGYVQTRGTLSGPITDTLAGRLSATRTHDDGFI
KNEYNGHELNGGTRDGLRGQLLYKPDDDFSLRLIASYNDEDSSAGTFPLYSTGPTINGVN
RYAQRAAAAGATLVYGDKVNIDSGQSIKVHQSGLSAEANWRMANDFTLTSITSYRTWNFK
PSNDDGLDVPAYYGTGVDVHDREWSQEFRLASPKGTYFDYVLGAYYFGQSLNNESFTRYG
PKADIWTGTPTGALNNVNSYGYGHIDVDSYALFAQGTWHLTPKLDLTAGVRATYEEKSGW
VNREAPEGGAAVTGAAATSRQAQIGAYDSGNVGLHATSPSGLLSLAYHVDDNLMGYASLS
HGEKSGGINMTVASAPTAGADSLLVGTERANAAELGLKSSWWDHRVTFNTDVFWTQVDGY
QTNAYDVASTSFYLTNAGSVRSRGVEFDTSILPIDNLTININGSYNQVTYLDYKDAPCPT
EISFQPGAPKTCDLTGHTVANAPRWIANVNGEYHWNLDNSLTPYVTGSYAYRSGAPGTVD
DSSYAQIPAYYLVNLSTGLRGNFHAGQWDLSLWAKNAFNRRYYTGLSNKNNGGFVSFLGD
PRTLGVTARYDF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccacgacgcttatcgcttcccctcaaccacctggtgctggccatggccctg
gccgcgtgcagttccgtgccgatggccgccatggccgaccagacggttggcaaacggcac
cactacaacatcgcccccggccccctggggtcggtactgctgagcatttcgcggcagagc
gggcaattgatcgccttcgacgccaccaccgtgcaagggcgcctggcgcctgccatcagc
ggcgacctggacgttgatcaggccctgggccgagcgctgcaaggcagtggcctggtggcc
gagcatgatgccaatggcacggtcagcctggtacctgccaaaaccgcggcagccaccccg
gagaaagccttgcagacggtgaccgtcacggcccgccgccgcgaggaaaatgcccaggac
gtgcctaccgcgatcaccagtctcagtggcaacgccctggaagcccagcgtatctaccgc
attcaggacatccagcaactggtgcccagcaccaccgtggcctatgttcacccacgccag
tcgagcatcgccgtgcgcgggttgggcaacaatgccgccagcgatgggctggaaggcagc
gtcggcgtgtacctggacaacgtctacctgagccgccccggcatggctgccttcgacctc
ctggacatcgaccagatcgacgtgctgcgtggcccccagggcaccctgttcggcaagaac
accacggctggggtggtcaacgtcaccacgcggccgcccacctttaccccggaacgcacg
gtggaaatgtccacgggcagccgtggctacgtacagacgcgcggtaccctttccgggccg
atcaccgacaccctggccggccgcctgtcggccacgcgtacccacgatgacgggtttatc
aagaacgaatacaacgggcacgaactcaacgggggcacccgggacggcctgcgggggcaa
ctgctctacaagcccgacgacgacttcagcctgcgcctgatcgccagctacaacgacgag
gactccagcgccggcaccttcccgttgtacagcaccggcccgaccatcaacggcgtcaac
cgctacgcccagcgcgccgccgcggccggcgccaccctggtgtacggtgacaaggtcaac
atcgactcggggcagagcatcaaggtccatcaaagcggcttgagtgccgaagccaactgg
cgcatggccaacgacttcaccctgacgtcgatcacgtcctaccgcacctggaacttcaag
cccagcaatgatgatggcctcgatgtgccggcctactacggcacgggcgtggacgtgcat
gaccgcgagtggtcccaggaatttcgcctggcgtcgcccaagggcacctatttcgattac
gtgctgggggcgtactactttggccagagcctgaacaacgagtcgttcacccgctatggc
cccaaggccgatatctggaccggcacgcccactggcgcgctcaacaacgtcaactcctac
ggctatggccatatcgacgtggacagctacgcgctgttcgcccaaggcacctggcacctg
acgcccaagctcgacctgacggccggggtgcgcgcaacgtacgaagagaagagcggctgg
gtcaaccgcgaggcgcccgaaggaggcgcggcagtcactggcgcggccgctacctcgcgc
caggcgcagatcggcgcctacgactcgggcaacgttggcctgcacgccaccagcccgtcg
ggcctgttgagcctggcctaccacgttgacgacaacctgatgggctacgcctcgctgtcc
cacggggagaagtccggcggtatcaacatgacggtggccagcgcgccgacggcgggcgca
gattcgctgctggtgggtacagagcgtgccaacgctgcggagctggggctcaagagcagt
tggtgggaccaccgcgtcaccttcaacaccgacgtgttctggactcaggtcgatggctac
cagaccaacgcctacgacgtggccagtaccagtttctacctgaccaacgctggcagcgta
cgctcgcgcggggtggagttcgacacctcgatcctgcccatcgacaacctgaccatcaac
atcaacggctcgtacaaccaggtgacctacctggactacaaggacgcaccatgcccgacc
gagatcagctttcagccaggtgcccccaagacctgcgacctgaccggccacacggtggcc
aacgcgccgcgctggatagccaacgtcaacggtgagtaccactggaacctggataacagc
ctcaccccctacgtgaccggtagctacgcctaccgttcgggcgcgcctggcacggtggac
gactcctcttacgcgcagatcccggcctattacctggtcaacctgtccacgggcttgcgc
ggcaacttccatgcggggcagtgggacctttccctgtgggccaagaacgcgttcaaccgg
cgttactacacagggctttcaaacaagaacaacggcggtttcgtttccttcctgggtgac
ccgcgcaccctgggcgtgaccgcgcgctacgacttctga
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