Pseudomonas silvicola: LZ023_23450
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Entry
LZ023_23450 CDS
T10729
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
psiv Pseudomonas silvicola
Pathway
psiv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZ023_23450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_23450
Transporters [BR:
psiv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LZ023_23450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WAH55972
LinkDB
All DBs
Position
complement(5131995..5133629)
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AA seq
544 aa
AA seq
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MHPTFKTFTLAALCVALAACDRSTPVAQRSTTPVSGGTLVYATDREPTCLDPHVSGDMPQ
VFVGQQYLDSLVSMDENGKIGPWLAKSWEVSADGTTYTFHLRDDVHFTDGTPFNAAAVKA
NLDHMANPKTQSSTAGGYIRQYVSTDVVDEHTAVVHLSSPYAAFLEVLAQGFLGIESPTA
LLRSRDENCQSPVGSGPFKVIKWDRQSQVELVRNPDYNWAPPTAHHQGPAYLDRVVWKFI
PEPSVRFASLQAGEVDVIEALPPESHAAARHNPDLSLMIALRPGNPTNGTLNTRRVPFND
VKVREAFVRSADVEGALKSVYFGEFPRAGAPLSSATRFHSADFEHAQDYDPARANHLLDE
AGWTGRDAQGYRTRDGQRLQVHVIMSNETPPSEQTLWEQVQATTRAVGFEVLIDQMSAVQ
ATDHQAKWDYDVIPEYWNTNTADVLRIIFSSQFLQPAGVGGYHQNTAGFDDKTFDQTLEG
ALATQDPQQRQALYYQAQAIASRNYLQLTTYPQSTRLGIYKTTQGVRIEPSLAVTYLYDA
WVNK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgcatccaaccttcaagactttcaccctggccgcgctgtgcgtggcgctggcagcgtgc
gaccgcagtaccccagtggcacagcgcagcaccacgcccgtcagcggcggcacgctggtc
tatgccaccgaccgcgagcccacctgcctggacccccatgtgtccggcgacatgccccag
gtgttcgtggggcagcagtacctggactcgctggtgtccatggacgagaacggcaagatc
ggcccttggctggccaaaagctgggaggtctccgccgacggcaccacctataccttccac
ttgcgcgatgacgtgcatttcaccgatggcacgccgttcaacgccgccgccgtgaaggcc
aacctcgaccacatggccaaccccaagacccagtccagtacggccggtggctatatccgc
cagtacgtcagcacggacgtggtggatgagcacaccgccgtggtgcacctgtcctcaccc
tatgccgcgttcctggaagtactggcgcaagggtttctgggcatcgagtcgcccaccgcg
ctgctgcgctcgcgggacgaaaattgccagtcgccggtgggttcggggccgttcaaggtg
atcaagtgggaccgccagagccaggtcgagctggtgcgcaaccccgattacaactgggcg
ccgcccacggcccatcatcaagggccagcctatctggaccgggtggtgtggaagttcatt
cccgaaccatcggtacgcttcgcttcgctgcaggccggtgaggtggacgtgatcgaggcg
ctgccgcccgaatcgcacgcagcggcccggcataacccggacctgagcctgatgattgcc
ctgcggcccggcaaccccaccaacggcaccctcaacacccgccgggtgcccttcaacgac
gtgaaggtgcgcgaggcctttgtgcgcagcgccgatgtggagggcgcgctcaagagcgtg
tacttcggcgagtttccgcgggccggggcgccgttgagttcagccacgcggtttcacagc
gctgacttcgagcacgcgcaggactatgacccggcccgggccaaccacctgttggatgag
gccggctggacggggcgcgacgcccagggttaccgcaccagggacggccagcgcctgcag
gtgcatgtgatcatgagcaatgagaccccgccctcggagcagaccttgtgggaacaggtg
caagccaccacccgcgccgtcggcttcgaggtgttgatcgaccagatgagcgcggtgcag
gccaccgaccaccaggccaaatgggactacgacgtcattcccgagtactggaacaccaac
accgccgacgtgctgcgcatcatcttcagctcgcagttcctgcaaccggcgggtgtgggc
gggtaccaccagaacaccgcgggctttgacgacaagaccttcgaccagacgctggagggc
gccctggccacccaagacccgcaacagcgccaggccttgtattaccaggcacaggcgatc
gccagccgcaactacctgcaactgaccacctacccgcaaagcacgcgcctgggcatctac
aagactacccagggcgtgcgcatcgagccctccctggccgtgacctacctctatgacgca
tgggtgaacaaatga
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