Pseudomonas silvicola: LZ023_24285
Help
Entry
LZ023_24285 CDS
T10729
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiv03000
]
LZ023_24285 (rutR)
Transcription factors [BR:
psiv03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LZ023_24285 (rutR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
WAH56129
LinkDB
All DBs
Position
complement(5322228..5322902)
Genome browser
AA seq
224 aa
AA seq
DB search
MKKEPAAPAKTPRTPSASTLKRRHRLVEGKRAVILDAALQLFSRFGVHGTSLDQVASLAD
VSKTNLLYYFSSKDELYLSVLRQLLDVWLRPLRGFSAEQDPVQAIGDYIRIKLELSRDHP
AESRLFCLEIVQGAPLLLKELQEPLRELVDSKVKVIQAWIDAGQLAAIEPHHLIFSLWAT
TQHYADFASQVAALTGKGLSDPVFFQEVLGNVQGLILNGLRPRG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaagaacccgctgccccggccaagacgccgcgtacgcccagcgcctccaccctc
aagcgtcgccaccggttggtggaaggcaagcgtgcggtgatcctggacgctgccctgcaa
ctgttctcccgtttcggcgtgcatggcaccagcctggaccaggtcgcgagcctggccgac
gtgtccaagaccaacctgttgtactacttcagcagcaaggacgagttgtacctgagcgtg
ctgcgccaactgctggacgtgtggttgcgccccttgcgcggcttcagcgccgagcaggac
ccggtacaggccatcggcgattacattcgcatcaagctggaactgtcccgcgaccacccg
gccgagtcgcggctgttctgcctggagatcgtccagggcgcgccgttgctgctcaaggaa
ttgcaggagccgctgcgcgagctggtggacagcaaggtgaaggtgatccaggcctggatc
gatgccggccagttggcggccatcgaaccgcaccatctgatcttttccctgtgggccacc
actcagcattacgccgacttcgccagccaggtggcggcgttgacgggcaaggggctgagt
gacccggtgtttttccaggaggtattggggaatgtgcaggggctgattctcaatgggctt
cggccgcgggggtga
DBGET
integrated database retrieval system
