Pseudomonas silvicola: LZ023_26405
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Entry
LZ023_26405 CDS
T10729
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
psiv Pseudomonas silvicola
Pathway
psiv03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
psiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZ023_26405
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LZ023_26405
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GFIT
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NCBI-ProteinID:
WAH56515
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Position
5842522..5845032
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AA seq
836 aa
AA seq
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MKPIGQSGYVQVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLIDQVGVPDVDSIDGLPPAVALQQQRGTPSTRSSVGSVTTLGSLVRMLYSR
AGHYPAGMGILYAEDFSPNTPQGACPECHGLGRVYEVNEQTMVPDDSLTLRERAVAAWPT
AWQGQNLRDILVTLGYDVDIPWRDLPQEQRDWILYTEEQPTVPVYAGLTPAETRQALKRK
LEPSYQGTFTGARRYVLHTFTHSQSALMKKRVSQFMRGTLCPLCQGKRLKQEALQVTFAG
LDIGALSQMPLARLAEVLAPLAAHGDPGGLSVEKHLAAQRLAHDLLQRIHTLTDLGLGYL
ALERSTPTLSSGELQRLRLATQLNSQLFGVIYVLDEPSAGLHPADGEALFDALQRLKAAG
NTLFVVEHDLETMRRADWLVDVGPAAGEHGGTVLFSGPPHGLADIDESQTRLHLYGDAQP
LPHPRRKPVDWLKLADVTRNNLRRLAVDFPLHAFTAVTGVSGSGKSSLVSQALLELVAEA
LGHTLADEDDSPDNPLEDAAPETESGHIVSGMGAIQRLVKVDQKPIGRTPRSNLATYTGL
FDQVRKLFAATPAARERGFDAGQFSFNVAKGRCPQCEGEGFVSVELLFMPSVYAPCPTCH
GQRYSPQTLEVQCLGLNIAQVLQLTVDQACEVFAEQPPVRRALAVLRDIGLGYLRLGQPA
TELSGGEAQRIKLATELQRGQRGATLYVLDEPTTGLHPCDVDRLLAQLNGLVDAGNTVIV
VEHDMRVVAQSDWVIDMGPGAGDKGGNVVVCGRPEKVAKARASRTAPYLAAVLAEG
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatcggccagtccggctacgtgcaagtgcgcggtgcccgcgagcacaacctc
aagaacgtcgatgtcgatatcccacgtgatgccctggtggtcttcaccggcgtgtcgggg
tcgggcaagtcttcactggcctttggcaccctctacgccgaggcgcaacggcgctacttc
gaatcggtggcgccctacgcccggcgcctgatcgaccaagtgggggtgcccgacgtcgac
agcatcgacggcctgcccccggccgtggccctgcaacagcaacgcggcacgcccagtacg
cgctcctcggtgggcagcgtgaccaccctgggcagcctggtgcgcatgctctattcgcgc
gccggtcattaccctgccggcatgggcattctgtatgccgaggatttctcgccgaacacc
ccacagggcgcctgccccgagtgccatggcctgggccgggtgtacgaagtgaacgaacag
accatggtgccagatgactcgctgaccctgcgcgagcgcgccgtggccgcctggccgacc
gcctggcagggacagaacctgcgcgacattctggtgaccctgggctatgacgtcgacatt
ccctggcgtgacctgccccaggaacagcgcgactggattctctacaccgaagagcaaccc
acggtgccggtgtacgcgggcctcaccccggccgaaacccgccaagccctcaagcgcaag
ctggagcccagttaccagggaacctttaccggcgcccgccgctacgtgctgcataccttc
acccattcccagagcgcgctgatgaaaaagcgcgtcagccagttcatgcgcggcaccctg
tgcccgctgtgccaaggcaagcgcctgaaacaggaggcgctgcaggtgaccttcgccggc
ctggatatcggcgcgctgtcgcagatgcccctggcgcgcctggccgaagtactggccccg
ctggccgcccacggtgaccccggcggcctgtcggtggaaaaacacctggccgcccagcgc
ctggcccacgacctgctgcagcgtattcacacccttaccgacctgggcctgggctacctg
gcgctggagcgcagtacaccgaccctgtcgtccggcgagctacagcgcttgcgcctggcc
acccagctcaactcgcaactgttcggcgtgatctacgtgctggacgagccctcggcaggc
ctgcaccccgctgatggcgaggccctgttcgacgccctgcagcggctcaaggccgctggc
aacacgctgttcgtggttgagcatgacctggagaccatgcgccgcgccgactggctggtg
gacgtcggcccggcggcgggcgaacacggcggcacggtgctgttcagcggcccgccccac
ggcctggccgatatcgacgaatcgcagacccgcctgcacctgtatggcgacgcccagccc
ctgccgcaccccaggcgcaagccggtggactggttgaagctggcggacgtgacgcgcaat
aacctgcgacgcctggcggtagactttcccctgcacgcgttcacggcggtgaccggggtc
agtggctcgggcaagtcgagcctggtcagccaggccttgctggaactggtggccgaagcg
ttggggcatacgctggcggacgaggacgacagccccgataacccgctggaggacgccgcg
ccggagaccgaatcgggccatatcgtcagtggcatgggcgccatccagcgtctggtgaag
gttgaccagaagccgatcggccgtaccccccgctccaacctggcgacctacaccgggctg
ttcgaccaggtgcgcaagctgttcgccgcgacccccgcggcccgcgagcgtggcttcgac
gccgggcaattctcgttcaatgtcgccaagggccgctgcccacagtgcgaaggcgagggt
ttcgtcagcgtcgagctgctgttcatgcccagcgtctacgccccctgccctacctgccac
ggccagcgctacagcccgcagaccctggaggtacaatgcctggggctgaatattgcccaa
gtgctgcaattgaccgtggaccaggcgtgcgaggtatttgccgaacagccgcccgtgcgc
cgcgccctggcggtactgcgcgatatcggcctgggctacctgcgcctgggccagccagcc
acggagctgtccggtggcgaagcccagcgcatcaaattggccaccgagctgcaacggggc
cagcgcggcgccaccctgtacgtgctcgacgaaccgaccaccggcctgcacccttgcgac
gtggaccggctgctggcgcaactcaacggcctggtggacgccggcaacacggtgatcgtc
gtggagcacgacatgcgcgtggtagcccagagcgactgggtgatcgacatgggccccggt
gccggtgacaagggcggcaacgtggtggtctgcgggcgcccggagaaagtcgccaaggcc
cgcgccagccgcacggcgccctacctggccgcagtgctggccgagggctga
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