Pseudomonas silvicola: LZ023_26435
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Entry
LZ023_26435 CDS
T10729
Name
(GenBank) GAF domain-containing protein
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZ023_26435
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiv01001
]
LZ023_26435
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psiv02022
]
LZ023_26435
Enzymes [BR:
psiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LZ023_26435
Protein kinases [BR:
psiv01001
]
Histidine kinases
CheA family [OT]
LZ023_26435
Two-component system [BR:
psiv02022
]
CheA family
Cph1-Rcp1 (light response)
LZ023_26435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
HATPase_c
PAS_2
GAF
HisKA
PAS
PAS_4
HHH_5
PAS_9
Motif
Other DBs
NCBI-ProteinID:
WAH56521
LinkDB
All DBs
Position
complement(5853104..5855362)
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AA seq
752 aa
AA seq
DB search
MTSGDISAALAQATANCAKEPIHLPGSIQPHGFMLVLEPNTLAVLQASENIQRWLGQAAE
QWLGRHLPELLQGGEQVARLLAERTSEEHKPVHVADVRFAVGNYDGPPIALMVHRFDSVV
IAEFEPASDVLAAYANLYPLVRTFIGQLQGAESIEQVCAQAVAEVKRITGFGRVKAYRFD
EAGDGLVLAELADEGYPSYLGLCFPAADIPPQARALYCANRIRVIEDANYVPAALVPALN
PLTGRPLDLSYAALRSVSPVHLHYMRNMRTLASMSISIVVGGRLWGLISCHHAEPRAVRF
QSRTACELLGSVLSLQIESMELHVRNQRLLGVRQQIVQLLSVMADRDSVRDGALALSDTL
LGFARAQGAAIITASSCDLVGETPDEAMVLALTEWLAERGGHEVFHSDNVGRDIPSLPGL
AAQVGGVLAVAISEIHSHYLIWFKPEQARSVVWAGKPEKSISDSGVLNPRHSFDSWQETV
KGYSSPWDPLEIEGVAELRTAVLGIVLRKAEELAQLAGELKRSNKELEAFSYSVSHDLRA
PLRHIAGYAELLGDFEGEKLSERGQRFLDHIGESARFAGSLVDNLLSFSQMGRSALRLSD
VDLGALVEAIRQEMVPDYEDREVQWRIGPLPRVLADAAFLHLALRNLISNALKYSRGSNP
AVIEIGATEQNGETVVYVRDNGVGFDMEYVDKLFGVFQRLHRMEEFEGTGIGLASVRRII
ERHDGRVWAQGALGEGATFSFALPHAPARNPA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgacatccggcgatatttcagcggcattggctcaggccaccgccaattgcgcgaaagag
cccatccacttgcccggcagcattcagccccacggtttcatgctggtgcttgaacccaat
accctggcggtgctgcaggccagtgaaaatattcagcgctggcttggccaagccgctgag
cagtggctggggcggcacctgccggaattgctgcaaggcggcgaacaggtagcgcggctg
ttggccgagcgcaccagtgaagagcacaagcccgtgcacgtggccgatgtgcgttttgcc
gtgggcaactatgacggcccgcctatcgcgctgatggtgcaccggttcgatagcgtagtg
atagccgagttcgagccggccagcgatgtgctcgccgcctacgccaacctttatcccttg
gtacgcaccttcatcggccagttgcaaggcgccgagagcatcgagcaggtgtgtgcccag
gcggtggccgaggtcaagcgcatcaccggcttcggccgagtcaaggcgtaccggttcgat
gaggcgggcgacggcctggtattggccgaactggccgacgaaggctaccccagctacctg
ggcctgtgcttcccggcggcggatattccgccccaggcgcgggcgttgtattgcgccaac
cgtatccgggtgatcgaggacgccaactacgtacccgccgccctggtgccggcgctcaac
ccgttgaccgggcggccgctggacctcagttacgccgcgctgcgcagcgtgtcgcccgta
cacctgcactacatgcgcaacatgcgcaccctggcgtccatgtcgatctccatcgtcgtg
ggcggccggttgtgggggctgatttcctgtcaccatgccgaaccccgggcggtgcggttc
cagagccgcaccgcgtgtgagctactgggtagcgtgctgtcgttgcagatcgagtccatg
gaactgcatgtacgcaaccagcgcctgctgggcgtgcgtcagcagatcgtgcaattgctc
tcggtcatggctgaccgtgacagcgtgcgcgacggggcgctggccttgagcgataccttg
ctcggctttgcccgcgcacagggcgcggccatcatcacggcctccagctgcgatctggtg
ggtgaaacgcccgacgaggccatggtgctggcgctgaccgagtggctcgccgagcgcggc
gggcatgaggtgttccacagcgataatgtcggccgcgatattccttcgctgcctggcttg
gctgcccaggtgggcggtgtgctggccgtggctatctcggaaatacattcccactacctg
atctggttcaagcctgaacaggcacgcagtgtggtctgggccggcaaaccggaaaaaagc
atcagcgacagcggcgtgctcaacccgcgtcacagcttcgacagctggcaggagaccgtc
aaaggttactccagcccctgggacccgctggaaatcgaaggcgtggcggaactgcgcacg
gcggtgctgggcatcgtgctgcgcaaggccgaggaactggcgcaactggccggtgaactc
aagcgctccaacaaggaactggaagccttctcctacagcgtgtcccacgatttgcgtgcg
ccgttgcgccatatcgctggctacgccgagctgttgggcgacttcgagggcgagaaactg
tccgagcgaggccagcgtttcctcgaccacatcggcgagtctgcgcgtttcgccggcagc
ctggtggacaacctgctgagcttctcgcagatggggcggtccgcgctgcgcctgtccgat
gtcgacctgggcgcgctggtggaagccattcgccaggaaatggttcccgactatgaagac
cgcgaagtgcaatggcgcatcgggccgttgccacgtgtgctggcggatgccgcgttcctg
cacctggcgttgcgcaacctgatttccaacgccctcaagtacagccgtggcagcaacccc
gcggtcatcgaaatcggtgccactgagcaaaatggcgaaaccgtggtctatgtccgtgac
aacggtgtcggttttgatatggaatacgtcgacaaattattcggcgtgttccagcgcctg
caccgcatggaggagttcgagggtaccggtattggcctggccagtgtccggcgtatcatt
gaacgccatgatggccgtgtatgggcccagggtgccctgggcgaaggggcgacgttcagt
ttcgccttgccccacgcaccagcccgcaatcccgcatga
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