Pseudomonas silvicola: LZ023_28175
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Entry
LZ023_28175 CDS
T10729
Symbol
cynR
Name
(GenBank) transcriptional regulator CynR
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiv03000
]
LZ023_28175 (cynR)
Transcription factors [BR:
psiv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LZ023_28175 (cynR)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WAH56841
LinkDB
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Position
complement(6216543..6217463)
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AA seq
306 aa
AA seq
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MIIPIIRAYGDAVLLRHIRYLLAVADHGNFTRAAETLHVSQPALSQQIKQLEGTLGVQLF
DRSGRTVVLTDAGRVYLEYARRSLRELDAGQQALMDVGDLSRGRLRLGVTPTFNEYLVAP
LIDRFTALHPGVAIALTEMSLEQVVTALGNDALDLAIGFNGDHGPEVECQPLFDETLCLV
MGGPERPKPPSLSLADLQALPFALLTPEFATRRLVDTWCQAQRFTPSIALEANSIAILLK
VVAQGRMATILPRAIVGEQPALHEVPLTLALPRRTAALLRRSDAYRSVASQAFVRLLHGE
GRLHRS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcattccaataatcagggcttatggtgacgccgtgctgctacgtcatatccgctac
ctgctggccgtggccgaccatggcaacttcacccgtgcggctgaaacgctgcatgtgtcg
cagccggcgctgtcgcagcagatcaagcagttggagggcaccctgggggtgcagctgttc
gatcgtagcgggcgtacggtggtgctgaccgatgccggtcgggtttacctggaatacgcg
cggcgctccttgcgtgagctggacgccggccagcaagccttgatggatgtgggtgatttg
tcgcgggggcgcttgcgcctgggcgtgacgcctacgttcaacgaatacctggtggcgccg
ctgattgaccggttcacggccttgcaccccggggtggccattgcgctgacggaaatgtcc
ctggagcaggtcgtgactgccttgggcaatgatgccctggacctggccatcggttttaac
ggcgaccatgggccagaggtggagtgccagcctttgttcgatgagaccttgtgtctggtc
atgggcggcccggagcgcccgaagccgccgtcgttgagcctggcggacttgcaagcgcta
ccgttcgcgttattgacgccggagtttgccacgcgccggctggtggatacctggtgccag
gcgcagcgcttcacgccaagcattgcactggaggcgaattcgattgccatcctgctcaag
gtggtggcgcaggggcgcatggcgacgatattaccgcgcgccatcgtgggtgagcagcct
gcgctgcacgaggtgccgctgaccttggcgctaccgcgacggacggcggccttgttgcgg
cgcagcgatgcttatcggagcgtggcgtcgcaggcatttgtacggttgctgcacggtgaa
gggcgcctgcatcggtcctga
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