Pseudomonas silvicola: LZ023_28490
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Entry
LZ023_28490 CDS
T10729
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZ023_28490 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiv03400
]
LZ023_28490 (xthA)
Enzymes [BR:
psiv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LZ023_28490 (xthA)
DNA repair and recombination proteins [BR:
psiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LZ023_28490 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WAH56898
LinkDB
All DBs
Position
6285583..6286395
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPLAEVEALGYHVHFHGQK
GHYGVALLSRQAPLALHKGFATDEEDAQRRFIWGTFADANGTPITVMNGYFPQGESRDHP
TKFPAKQRFYEDLQALLEGQFTNDQPLVVMGDVNISPEDSDIGIGPDNAKRWLKTGKCSF
LPEEREWMARLKNWGLVDSFRHLNPEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASRGL
LPRVADAGVDYELRGMEKPSDHAPIWLKLT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtctcattcaacatcaacggcctgcgcgcccggcctcatcagctggcggcg
ctgatcgagaagcaccagcccgacgtcatcggcctgcaggaaaccaaggtcagcgacgaa
cagttcccgctggcggaagtcgaggcactggggtaccacgtgcatttccacggccagaaa
ggccactacggcgtggccctgctctcgcgccaggcgccgctggctctgcacaaaggcttc
gccaccgacgaggaagacgcccagcgccggttcatctggggcaccttcgctgacgccaac
ggtacgccgatcaccgtcatgaacggctacttcccccagggcgaaagccgcgaccacccc
accaagttcccggccaagcagcgcttctacgaagacctgcaagccctgctggaaggccag
ttcaccaacgaccaaccgttggtggtgatgggtgacgtgaacatttccccagaagacagc
gacattggcatcggcccggataacgccaagcgctggctgaaaaccggcaaatgcagtttc
ctgcccgaagaacgggaatggatggcgcgcctgaagaactggggcctggtggacagcttc
cgccacctcaaccctgaggtggccgaccgtttcagctggttcgactaccgcagccgcggc
ttcgaggacgagcccaagcgcgggctgcgcatcgacctgatcatggcgtcccgaggcctg
ctgccacgggtggccgacgccggggtggattatgagcttcgggggatggagaagccttcg
gaccacgcgccgatctggttgaagctcacttga
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