Pseudomonas silvicola: LZ023_28520
Help
Entry
LZ023_28520 CDS
T10729
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00280
Valine, leucine and isoleucine degradation
psiv00650
Butanoate metabolism
psiv00907
Pinene, camphor and geraniol degradation
psiv01100
Metabolic pathways
psiv01120
Microbial metabolism in diverse environments
psiv04146
Peroxisome
Module
psiv_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LZ023_28520
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LZ023_28520
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LZ023_28520
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LZ023_28520
Enzymes [BR:
psiv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LZ023_28520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
WAH56902
LinkDB
All DBs
Position
6291245..6292144
Genome browser
AA seq
299 aa
AA seq
DB search
MFLPHAVRLVEVGPRDGLQNEASPISVADRVQLVDELTACGFSYIEAGSFVSPKWVPQMA
GSAQVFAGINRHPGVTYAALTPNLQGAEAALAAGVGEVAVFAAASEAFSQRNINCSIRQS
LERFAPVMAVARAAGVPVRGYISCVLGCPYEGAIAPAQVAAVAAELHAMGCREISLGDTI
GVGTPGVTRTLFDTVAAVVPRGQLAGHFHDTYGQALANIYAALLEGVSVFDSSVAGLGGC
PYAKGASGNVASEDVVYLLQGLGIDTGVNLDALISVGQRISQQLGRANGSRVAQARTCA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccccacgctgtacgcctggtggaagtcggcccccgcgatggcttgcagaac
gaagccagccccatcagcgtcgctgacagagtacagctggtggatgagctgaccgcctgt
gggttcagctatatagaagccggcagctttgtctccccgaaatgggtgccacagatggcc
ggctcggcgcaggtgttcgctggtatcaaccgtcacccgggtgttacctatgccgcgctc
acacccaacctgcaaggtgcagaggcggcgctggccgcaggtgtcggggaagtggccgtg
ttcgcggcggcgtccgaggctttctcgcaacgcaacatcaattgctccatccgccagagc
ctggagcgcttcgcgccggtaatggcggtggcccgcgccgccggtgtgccggtgcgaggt
tacatctcctgtgtgctcggctgcccttacgagggcgccattgccccggcccaggtggcc
gcggtggccgctgaactgcacgccatgggctgccgcgaaatatccctgggtgacaccatc
ggtgtgggtaccccgggtgttacgcgcacgctgttcgataccgtggccgccgtggtaccc
cgcgggcaattggcggggcacttccacgacacctatgggcaggcactggccaatatctac
gcggcgctgctggagggggtcagtgtattcgacagctccgtggccggcctgggcggctgc
ccctacgccaaaggcgccagcggcaacgtggccagcgaggacgtcgtgtacctgttgcag
ggactgggcatcgacaccggggtaaacctggacgccttgatcagcgtgggccagcgtatc
agccagcagcttgggcgggcgaacggctcgcgggtagcacaggcgcgcacctgtgcgtga
DBGET
integrated database retrieval system