Pseudomonas silvicola: LZ023_28835
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Entry
LZ023_28835 CDS
T10729
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psiv01011
]
LZ023_28835
Enzymes [BR:
psiv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LZ023_28835
Peptidoglycan biosynthesis and degradation proteins [BR:
psiv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LZ023_28835
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM_RLK
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
WAH56963
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Position
6362471..6363925
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AA seq
484 aa
AA seq
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MSSTIRKPFTSDALTRLAQAVALALPVVLAGCQSTSQVPDAESVRLHSLNTRIKQKPIFP
EVQQAQQAPQDVWERMRQGFQLQDGVAVNPRVEQQRLWFVSNPSFLENASGRGSLYMHYI
VERLEERNMPLELALLPVIESAYNPMAYSRSDASGLWQFIPSTGRYFNLRQTRFYDGRRD
VTASTTAALDYLSRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQ
ETKDYVPKLLALSELVMSPEAYGVNLNPIANQPYFEVVEVNQQMDLGRVAALANIDEDEL
FQLNPALKQRMTVDGPQHLLVPTAKAHMLTESLAKMGPEELLSLAPTRKVMADIARAELP
ARRRAYKVKRGDNLSLIAKANKVDVRDLQRWNKLSGMHLKVGQTLVMQDNTRAVAKGRGK
ATAVASAGNGKNHQVATRYKIRKGDSLYVVAQRFNVEVNHLKRWNPNTARALKPGQTLVV
YRDR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaccattcgaaagcccttcacttccgacgcattgacgcggctcgcacaagcc
gtcgcgctggccctgcccgttgttctggcaggctgccaaagcacgagccaggttccggat
gccgaaagcgttcggctgcacagcctgaacacgcgcatcaagcaaaaacccattttcccc
gaggtacagcaggcccagcaggcgccccaggacgtatgggaacgcatgcgccagggcttc
cagttgcaggatggcgtagcggtgaacccgcgggttgaacaacagcgcttgtggttcgtc
agcaacccctcgttcctggaaaatgccagcggccgcggcagcctatacatgcactacatc
gtggagcgcctggaagagcgcaacatgccgttggagctggcgctgttgccagtgatcgaa
agcgcctacaaccccatggcctattcgcgcagcgatgccagcgggctgtggcagttcatt
ccgtccactggccgctatttcaacctgcgccagacccgtttctacgacggccgtcgcgac
gtcaccgcctccaccaccgccgcgctggactacctgagccgcttgcacgacatgttcaac
ggcgactggctgctggcgctggcggcctacaacgccggtgaaggcacggtcagccgggcc
atcgaacgcaacgagaagctgggcctgcccaccgactactggaacctgcccctgccccag
gaaaccaaggactacgtgcccaagctgctggcactgtcggaattggtgatgtcccccgag
gcctacggcgtgaacctgaaccccatcgccaaccagccctatttcgaggtggtggaagtc
aaccagcagatggacctgggccgcgtggcagccttggccaacatcgacgaggacgagctg
ttccagctcaaccccgccctcaagcagcgcatgaccgtggacggcccccagcacctgctg
gtgccgaccgccaaagcgcacatgctgaccgagagcctggcgaaaatgggcccggaagaa
ctgctgagcctggcgcctacacgcaaggtcatggcagacattgcccgcgccgaactgccg
gcccgtcgccgggcctacaaggtcaagcgcggcgacaacctgagcttgatcgccaaggcc
aacaaggtcgacgtccgcgacctccagcgctggaacaagctgtcgggcatgcacctgaag
gtcggccagaccctggtgatgcaggacaacacccgcgccgtggccaagggccgtggcaag
gctaccgccgtggccagcgccggcaacggcaagaatcatcaggtcgccacccgctacaag
atccgcaagggcgactcgctgtacgtggtggcccagcgtttcaatgtcgaggtcaaccac
ctcaagcgctggaaccccaacaccgcgcgcgcgctgaagccaggccagaccctggtcgtg
taccgcgaccgctga
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