Pseudomonas silvicola: LZ023_28935
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Entry
LZ023_28935 CDS
T10729
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
psiv Pseudomonas silvicola
Pathway
psiv02010
ABC transporters
psiv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LZ023_28935
03070 Bacterial secretion system
LZ023_28935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_28935
02044 Secretion system [BR:
psiv02044
]
LZ023_28935
Transporters [BR:
psiv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LZ023_28935
Secretion system [BR:
psiv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LZ023_28935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_29
AAA_22
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WAH56983
LinkDB
All DBs
Position
complement(6390472..6392619)
Genome browser
AA seq
715 aa
AA seq
DB search
MTDKDVPAAPAPPADTGITCLVMLARLFNIAACPEQLRREFADDGRLFGVQELLLAAGSL
GLEARRIRCSATRLDRTPLPAIAEDACGGYFIIAKAEHDQILIFDPAHLREETLSLDQLK
KRWQGGLLLVRAAAKDSGTPQRFGFTWFFPALIKHRKLLGEVLLVSMVLQVFGLVTPLFF
QVVMDKVLVHRGLTTLDVIAIGLLAVMCFETVLSGLRTYIFAHTASRIDVELGARLFRHL
LSLPLAYFQARRVGDSVARVRELENIRSFLTGNCLTVVLDVVFSVVFLVVMAMYSLQLTA
LVVLSLPLYFLVSLLVTPLLRIRLNESFDRGAQNQAFLVESISGIDTLKSMAVEPQTRRC
WDNQLAAYVGASFRTQNLSTLANESVGLIGKLVTVATLWLGARLVMSGDLSVGQLVAFNL
LAGRVSQPIMRLAQLWTQFQQIAISTRRLGDILNTHPEAGRLSRTPMPVIAGQIEFENVC
FRYRPEMEDALSGVSFSVAPGEVLGVVGRSGSGKSTLAKLVQCMHSPQQGSIRIDGMDLA
MVDCGSLRRQIGVVLQDNRLFQRSIRDNIALADPGAPLEAIVQAAKLSGAHEFILQLPQG
YDTPVGEQGASLSGGQRQRIAIARALMGDPRILVFDEATSALDYESERIVQDNMRSICRG
RTVIIIAHRLSAVRDADRIVVMDRGAIVEEGSHQALIDAGGQYARLRCLQQGGQP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaggatgtgcccgctgcccctgcgcccccggctgacaccggcatcacgtgc
ctggtgatgctggcaaggctgttcaacattgcggcctgcccggagcagctgcgtcgcgaa
ttcgctgacgatggccgcttgttcggtgtgcaggagctgttgctggctgccggcagcctg
ggccttgaagccaggcggatacgttgtagcgccacgcgcctggatcgcacgccacttccg
gcgattgcagaagatgcctgcggcgggtatttcatcattgccaaggccgagcacgaccag
atacttatcttcgaccctgcccatctgcgcgaagaaaccctgagtctggaccagctgaaa
aaacgatggcagggcggtctgctgctggtgcgagccgcggccaaggatagcgggacaccg
cagcgttttggcttcacgtggttcttcccggcattgatcaagcatcgcaagctgctgggc
gaggtgctgctcgtctcaatggtgcttcaggtattcggtctggtcaccccactgttcttc
caggtggtgatggacaaggtcctggtccatcgaggcttgaccaccctggatgtcatcgcc
atcggcttgctggcggtcatgtgtttcgagacggtcctcagcgggctgcgcacctatatt
tttgcccataccgccagtcgcatcgatgttgagctgggcgcgcgcctgttccggcatctg
ctctcgttgccgttggcgtactttcaagcacgccgtgtgggcgattcggtcgccagggtc
agggagctggagaacatccgcagctttctgacgggcaactgcctcactgtggtactcgac
gtcgtgttttcagtggtgttcctggtggtcatggcgatgtacagcctccaactgaccgct
ctggttgtcttgtcattgccgttgtacttccttgtttccctgctggtcactccgttgttg
cgaatccgcctcaacgagagctttgaccgaggggcgcagaaccaggcatttctggtagag
agcatcagcggcatcgatacccttaaatccatggcggtcgagccgcaaacccgccgctgc
tgggacaatcagctggccgcttatgtcggtgccagcttccgtactcaaaacctttccacc
ctggccaatgagtcagtaggcttgattggcaaactggtcacggtggcaacgctgtggctg
ggggccaggttggtgatgtctggtgacctgagcgtcgggcaattggtagcgttcaacctg
ttggccgggcgcgtctcccagccgatcatgcggctggcccagctttggacgcagttccag
cagattgctatttccacccggcggctgggggacatcctcaatacccatcctgaagctggg
cgcctgtcgcgcacgcccatgccggtgattgcaggacagatcgaattcgagaacgtgtgt
tttcgctaccgccctgaaatggaagatgccttgagcggggtcagcttcagcgtcgcgcca
ggcgaggtgctaggtgtcgtagggcgatcggggtccggtaaaagtacattggccaagtta
gtccaatgcatgcacagcccccagcaaggcagcatccgcatcgacggcatggacctggcg
atggtggattgcggttccctgcgccggcagatcggtgttgtgctgcaggacaatcggttg
ttccagcgcagtatccgcgacaacatcgccctggctgatccaggggctcctctggaggcg
atcgtccaggcggcgaagctctccggggcgcacgagttcatcctgcagttgccccagggc
tatgacaccccggtgggcgaacagggcgcttccctctctggcgggcagcggcagcgcata
gccatcgcccgcgcgttgatgggcgaccccaggatattggtgttcgacgaggccaccagt
gccttggattatgagtccgagcgcattgtgcaggacaacatgcggtcgatctgtcgcggc
cgaacggtgatcatcatcgcccataggctctcggctgtgcgagatgccgatcgcattgtg
gtgatggatcggggtgccattgtcgaggaaggcagccaccaggcgctgatcgatgccgga
gggcagtacgcccggttgcgttgtctgcagcagggagggcaaccatga
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