Pseudomonas silvicola: LZ023_31720
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Entry
LZ023_31720 CDS
T10729
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
psiv Pseudomonas silvicola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
AAA_16
AAA_5
AAA_19
AAA_22
HTH_30
OKR_DC_1_N
AAA_18
APS_kinase
AAA_7
HTH_28
nSTAND3
AAA_2
DUF815
TIP49
Motif
Other DBs
NCBI-ProteinID:
WAH57488
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Position
6985025..6986419
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AA seq
464 aa
AA seq
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MSHNVLVVDDEPKLCDLLVSALSQGEVQVFTAGNGLLALALMEQESIDLVISDWRMPGMD
GPQLLAEIRQRFPQVPVIVMTAYSTVKNAVQSMRNGAFDYIAKPFDIDELDITVHKALQF
RDILRDNARMRAELNEQHPFDSLVGESPTFRRVLQAIDAVRDSTATVLLTGESGTGKEMV
ARALHQHGNRAHQPFVAVNCAAIPEGLLESEMFGHKKGAFTGAVSDRIGRFQQADKGTLF
LDEVGDMPLALQAKILRALQERLIEPVGDTRERKVDVRVIAATHKNLVEAVARKEFREDL
YYRLNVFPIPLPALRERSEDIPGLAHHFAGLLGAQAGKRITGFSPRALQAMLDYGWPGNI
RELQNCVERATIVAQGSLIEEQDLPGYLFQPAAGQPEDALPLPVVGVPDDLDGKLAEVEK
AWILAALQQTNGVQAAAAQLMGISERSLWYRLKKLAIQVSKFAR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcataacgtgctggtggtcgacgacgagcccaaactctgcgatttgctggtgtca
gcattgagccagggcgaggtgcaggtcttcaccgccggcaacggcctgctcgccctggcg
ctgatggagcaggaaagcatcgacctggtcatcagtgactggcgcatgcccggcatggac
ggcccgcagttgctggccgagatcaggcaacgcttcccgcaggtgccggtgatcgtcatg
accgcctactccacggtgaagaatgccgtgcagtccatgcgcaacggcgccttcgactac
atcgccaagccgttcgacatcgatgagctggacatcaccgtgcacaaggccctgcagttt
cgcgacattctgcgcgacaacgcccgaatgcgcgccgaactgaacgaacagcacccgttc
gacagcctggtgggtgaaagcccgacgtttcgccgcgtgctgcaggccatcgacgcggtg
cgcgacagcacggccacggtattgctgaccggcgaaagcggcaccggcaaggaaatggtt
gcccgcgcccttcaccagcatggcaaccgtgcccaccagccgttcgtggcggtaaactgc
gcggccatccccgaggggctgctggaaagcgagatgttcggccacaagaaaggtgccttc
actggcgcggtcagcgaccgcatcgggcgcttccagcaggcggacaagggcaccctgttc
ctcgatgaagtgggcgacatgcccctggcgctgcaggccaagatcttgcgggccttgcag
gagcggttgatcgagccggtgggcgacacccgcgaacgcaaagtggacgtgcgggtcatc
gccgccacccacaagaacctggtggaagcggtggcacgcaaggagtttcgcgaagacctc
tactaccgtctcaacgtattccccatccctctgccggccctgcgcgagcgcagcgaggac
atccctggcctggcccaccacttcgcgggcctgctgggcgcacaagccggcaaacgcatc
accggcttcagcccccgggcgctgcaggcgatgctcgactatggctggccgggcaacatc
cgcgagctgcagaactgtgtggagcgcgccaccatcgtcgcccagggcagcttgatcgaa
gaacaggacctgcctggctacctgttccagccagccgctggccaaccggaagacgccctg
ccgttgccggtggtgggtgtgcccgacgacctggatggcaaactggcagaagtggaaaaa
gcctggatcctggcggcactgcagcagaccaatggcgtgcaggcggcggctgcgcaactg
atgggtatttccgagcgcagcttgtggtaccggctgaagaagctggcgatccaggtcagc
aagttcgcgcggtga
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