Pseudomonas silvicola: LZ023_32085
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Entry
LZ023_32085 CDS
T10729
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv00061
Fatty acid biosynthesis
psiv00071
Fatty acid degradation
psiv01100
Metabolic pathways
psiv01212
Fatty acid metabolism
psiv02024
Quorum sensing
psiv04146
Peroxisome
Module
psiv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LZ023_32085 (fadD1)
00071 Fatty acid degradation
LZ023_32085 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LZ023_32085 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZ023_32085 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psiv01004
]
LZ023_32085 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiv04147
]
LZ023_32085 (fadD1)
Enzymes [BR:
psiv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LZ023_32085 (fadD1)
Lipid biosynthesis proteins [BR:
psiv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LZ023_32085 (fadD1)
Exosome [BR:
psiv04147
]
Exosomal proteins
Exosomal proteins of breast milk
LZ023_32085 (fadD1)
Exosomal proteins of breast cancer cells
LZ023_32085 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WAH57555
LinkDB
All DBs
Position
complement(7064092..7065789)
Genome browser
AA seq
565 aa
AA seq
DB search
MIENFWKDKYPAGIAAHINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGQLYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVVVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAQHVVPKTSVKHVIVTQVGDLLPPVKRLLVNSVIKYVKKMVPAYH
LPNAVKFNDVISKGHGKPVREANPDANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMASNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNAEFRNLDFSALKVTLSGGMALQLAAADRWKAVTGCAICEGYGM
TETSPVASVNPIQNIQVGTIGIPVPSTQCRVVDENGRELGLGETGELCVKGPQVMKGYWQ
RQEATDEMLDADGWLKTGDIAVIQDDGYMRIVDRKKDMILVSGFNVYPNELEDVLVTLPG
VLQCAAIGVPDEKSGEAIKMFIVARPGVTLTKDQVMEHMRANVTGYKVPRAVEFREALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatttctggaaggataagtacccagcgggtattgctgcgcacatcaatcct
gacgaatatccgaatatccaggctgtgttgaagcagtcctgccagcgcttcgctgacaag
ccggcgttcagcaacctgggcaagacgctcacctacggtcaactgtacgaactgtcgggc
gccttcgcggcgtacctgcaacagcataccgatttgcaacccggcgatcgaatcgccgtg
caactgccaaacgttctgcagtacccggtggttgtgtttggcgctatccgcgctggcctc
atcgtggtcaacaccaacccgttgtacaccgcacgggagatggaacaccagttcaacgac
tctggtgccaaggccctggtatgcctggccaacatggcgcacctggcgcagcacgtggtg
cccaagacgtcggtcaagcatgtgatcgtcacccaggtgggcgacctgctgccaccggtc
aagcgcctgctggtgaacagcgtcatcaagtacgtgaagaaaatggtgccggcgtaccac
ctgcccaatgcggtgaaattcaacgacgtgatcagcaagggccacggcaagccggtgcgt
gaagccaaccccgacgccaacgacgtggccgtgctgcaatacaccggtggcaccaccggc
gtggccaagggcgccatgctcacccaccgcaacctggtggccaacatgctgcagtgcaaa
gcgctgatggcctcgaacctgaatgaagggtgcgagatcctcatcacaccgttgccgctg
taccacatctacgcctttacctttcactgcatggccatgatgctcatcggcaaccacaac
gtgctgatcagcaacccccgcgacctgccggccatggtcaaggagttgtcgaagtggaaa
ttcagcggtttcgtggggctcaacaccctgttcgtggccctgtgcaacaacgctgaattc
cgcaacctggacttctcggcgctgaaagtgaccctgtccggtggcatggccctgcaactg
gctgccgccgaccgctggaaagccgtgaccggctgcgctatctgtgaaggctacggcatg
accgaaaccagcccggtggcatcggtgaacccgatccagaacattcaggtgggcaccatc
ggcattcccgtgccgtccacccagtgccgggtggtcgatgaaaatggccgcgagctgggc
ctgggtgaaaccggcgagttgtgcgtcaagggcccgcaggtgatgaagggttactggcag
cgccaggaagccaccgacgaaatgctcgatgccgatggctggctgaagaccggcgacatc
gcggtgatccaggacgatgggtacatgcgcatcgtcgaccgcaagaaggacatgatcctg
gtctcgggcttcaacgtgtaccccaatgaactggaagatgtgctggtgactctgcccggc
gtgctgcaatgcgcggccatcggcgtgccggacgaaaagtccggcgaggccatcaagatg
ttcatcgtcgcccgtcccggcgtcaccctcaccaaggaccaggtcatggagcacatgcgc
gccaatgtcaccggctacaaggtgccgcgcgccgtggagttccgcgaagcgctgccgacc
accaacgtcggcaagatcctgcgccgcgagctgcgcgatgaagaactgaagaagctgggc
ctgaagaagattgcgtga
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