Pseudomonas silvicola: LZ023_32125
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Entry
LZ023_32125 CDS
T10729
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psiv Pseudomonas silvicola
Brite
Transcription machinery [BR:
psiv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LZ023_32125 (rapA)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WAH57562
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Position
7073268..7076114
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AA seq
948 aa
AA seq
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MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DQITHFEGWKLTVQEVEDVDGLLVYHGLDAQNQPCTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLEHTSKQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
GNPFEDAQLALVSLEWLTEDEKAQDALFAAGWDLLVVDEAHHLVWHETKASPQYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDK
GRLSPKAHATIQGFLGAEGEALLTAVNDGDTEAAARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLANPDEYMELPLGEHAELYPEVAFQAQAETDEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHIIELHVPYLQDSP
QERLFQWYHQALNAFLNTCPTGNALQHQFGPRLLPLLEGGDDDNWDALVAQARNERERLE
SELHTGRDRLLELNSGGGGEGKALVAAIEEQDDQFALPIYMETLFDAFGIDSEDHSDNAL
ILKPSEKMLDASFPLGDDEGVTITYDRHQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPQALRCLLDANGNDLSSRVSF
ATLNDQLESVPKASANKFIQAQRDVLGPRINAGETKVLPRHVERVAEAKRRLAAETEEEL
ARLTALQAVNPTVRDSELDALRKQREQGLAMFEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagcgacagcgaagcagagctaggt
ctaggcaccgttctggcacaggacgggcgcttgctgaccgtgctctacccggccactggc
gacacccgccaatatgccctgcgcaacgcgccgctgacccgggtgcggttctctcccggt
gaccagatcacccatttcgaaggttggaagctgaccgtgcaggaagtcgaggacgtcgac
ggcctgctggtctaccacggtctcgatgcccagaaccaaccgtgcaccctgccggaaacc
caactgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccggccagatc
gacccgctggcctggttctcgctgcgctacaacaccctggaacataccagcaagcagttg
cagtcgtcgctgtggggcctgggcggcgtgcgtgcgcaacccatcgcccaccaactgcac
atcgcccgtgaagtggccgaccgcattgccccgcgcgtgctgctggccgacgaagtgggc
ctgggcaagaccatcgaggccggcctggtcattcaccgtcagttgctgtcgggccgcgcc
agccgcgtgctgatcctggttccggaaaacctgcagcatcagtggctggtggagatgcgc
cgccgcttcaacctgcaggttgccctgttcgacgccgagcgcttcatcgagagcgacgcc
ggcaaccccttcgaagacgcgcaactggcgctggtctcgctggagtggctgaccgaagac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgctggtggtcgacgaggcc
caccacctggtgtggcacgaaaccaaggccagcccgcagtattcgctggtcgagcaactg
gccgaagtcatccctggcgtgctgctgctcaccgctaccccggaacaactgggccaggac
agccacttcgcgcgcctgcgcctgctggacccgaaccgtttccatgacctggccgccttc
cgcgccgagagcgaacactaccgccctgtggccgaagccgtgcaggaactgctggacaaa
ggccgcctgtcgcccaaggcgcacgcgaccatccagggcttcctgggcgccgaaggcgaa
gccctgctgacagccgtcaacgacggcgacaccgaagccgccgcccgcctgatccgcgaa
ctgctggaccgccacggcaccggccgcgtgctgtttcgcaacacccgcgccgccgttcag
ggtttcccggagcgcaagctgcacccgtacccgctggccaacccggacgagtacatggag
ttgccgctgggcgaacacgccgagctgtacccggaagtggccttccaggcccaggccgag
accgacgaggaaaaccgctggtggcgtttcgacccgcgggtggaatggctgatcgaccag
ctgaaaatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgagaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcgacggtcttccacgagggc
atgaacatcctggagcgtgaccgcgccgctgcctacttcgctgacgaggagttcggcgcc
caggtgctgatctgttcggaaatcggcagtgaaggccgcaacttccagttcgcccaccac
ctggtgatgttcgacctgcccgcccacccggacctgctggagcaacgtatcggccgtctg
gaccgtatcggccagaagcacatcatcgaattgcatgtgccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccaccaggcactgaacgcgttcctcaacacctgccct
accggcaacgccctgcagcaccagttcggcccgcgcctgctgccgttgctcgaaggcggt
gacgacgacaactgggacgccctggtggcgcaggcgcgcaacgagcgcgagcgcctggaa
agcgaactgcacaccggccgcgaccgcctgctggagctcaactccggcggtggcggtgaa
ggcaaggccctggtggccgccatcgaggagcaggatgaccagttcgccctgccgatctac
atggaaaccctgttcgatgccttcggcatcgacagcgaagaccattccgacaacgccctg
atcctgaagccgagcgaaaaaatgctcgacgccagcttccccctgggcgacgacgaaggc
gtgaccatcacctacgaccgccaccaggcgctgtcgcgtgaagacatgcagttcatcacc
tgggaacaccccatggtgcagggcggcatggacctggtgctgtccggttccatgggcaac
accgccgtggcactgatcaagaacaaggcactcaagcccggcaccgtgctgctggagctg
ctgtacgtcagtgaagtggtcgccccgcgcgcgctgcaactgggccgctacctgccaccc
caggcactgcgctgcctgctggacgccaacggcaacgacctgtcgtcgcgggtgtccttc
gcaaccctcaacgaccagttggaaagcgtaccgaaggccagcgccaacaagttcatccag
gcccagcgcgacgtccttggcccgcgcatcaacgccggtgaaaccaaggtactgccgcgc
catgtggagcgagtagccgaagccaagcgccgcctggccgctgagaccgaagaagagctg
gcgcgcctgaccgccctgcaagccgtcaacccgaccgtgcgcgacagcgaactggacgcc
ctgcgcaagcagcgtgaacagggcctggcgatgttcgagaaggccgcgctgcgcctggaa
gcgatccgggtgctcgtcgctggttga
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