Pseudomonas silvicola: LZ023_32720
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Entry
LZ023_32720 CDS
T10729
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiv03036
]
LZ023_32720 (xerD)
Chromosome and associated proteins [BR:
psiv03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LZ023_32720 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
WAH57675
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All DBs
Position
complement(7206254..7207150)
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AA seq
298 aa
AA seq
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MPAADHPLIDQYLDALWLEKGLSDNSRDAYRSDLTLFNGWLQEQGVALPQAGRELILDHL
AWRVDQAYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVE
ALLKAPDLSEPIGQRDRAMLEVLYACGLRVTELISLTLDQVNLRQGVLRVMGKGSKERLV
PMGEEAVVWVERYLRDGRNDLLGGRPSDVLFPSQRGEQMTRQTFWHRIKHQATVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHARHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcagaccacccgctcatcgaccaatacctcgacgccctgtggctggaaaag
gggctgtccgacaacagccgcgacgcctaccgcagtgacctgacgctgttcaatggctgg
ttgcaggaacagggtgtggcgttgccccaggcggggcgcgagctgatcctcgaccacctg
gcctggcgcgtcgaccaggcctacaagccacgctccacggcgcggtttctttcaggtgta
cgaggcttctatcgctatttgctgcgcgaaaagctgatcgccgtggacccgaccctgcag
gtggacatgccgcagttgggcaggccgttgcccaaatccctgtcggaagccgacgtcgag
gcgctgctgaaggcgccagacctcagcgagcccatcggccagcgtgaccgcgccatgctg
gaggtgctgtacgcctgcggtctgcgggtgaccgagctgatcagcctgacgctcgaccag
gtcaacctgcgccagggagtgctgcgggtgatgggcaaaggcagcaaggaacggctggtg
cccatgggcgaagaggcggtggtgtgggtggaacgctacctgcgggacggccgcaatgac
ctgctgggcgggcgccccagcgatgtgctgttccccagccagcgcggcgagcagatgacc
cgccagaccttctggcaccgcatcaagcaccaggccacggtggccggcatcggcaagtcg
ctgtcaccccacaccctgcgccatgccttcgctacccatttgctcaaccacggcgccgac
ctgcgcgtggtgcagatgctcctgggccacagcgacctgtccacgacccagatctacacc
cacgtggcccgggcccgcctgcaagacctgcacgcccgccaccacccacgcggctga
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