Pseudomonas silvicola: LZ023_34555
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Entry
LZ023_34555 CDS
T10729
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psiv Pseudomonas silvicola
Pathway
psiv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZ023_34555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_34555
Transporters [BR:
psiv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LZ023_34555
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WAH58008
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Position
7594773..7595798
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AA seq
341 aa
AA seq
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MVFNKGATAVLAASILAVSTSVAFAADSMSFVSWGGSTQDAQKAAWAEPFSKASDIKVVQ
DGPTDYGKLKAMVDSGNVQWDVVDVEADFALRAAAEGLLEPLDFKVIDRDKIDPRFVGDH
GVGSFYFSFVLGYNEGKLGAGKPQDWSALFDTKTYPGKRALYKWPSPGVLELALLADGVA
ADKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEASIGQFWNGRIYALQQDGAP
VGVSWKQNLVMADFLVIPKGSKNKDAAMKFLANSSSAKGQADFANLTAYAPVNKDSVSLL
KPELAPNLPTAYAKDQITLDFAYWAKNGPAIATRWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaacaaaggtgctaccgcggtccttgccgccagcattctggccgtctccacg
agcgttgcatttgccgccgacagcatgagcttcgtgagctggggcggctctacccaggac
gcacagaaggccgcatgggccgagccgttcagcaaggccagcgacatcaaggtcgtgcag
gacggccccaccgactacggcaagctcaaggccatggtcgacagtggcaacgtgcagtgg
gacgtggtcgatgtggaagccgacttcgccttgcgcgccgccgccgagggcctgctggaa
ccgctggacttcaaggtcatcgaccgcgacaagatcgacccgcgcttcgtcggcgaccat
ggtgtgggctcgttctacttctcgttcgtgctgggttacaacgaaggcaagctgggcgcg
ggaaaaccgcaggactggagcgccctgttcgacaccaagacctaccccggcaagcgcgcc
ctgtacaaatggccgagcccgggcgtgctggaactggccctgctggcagacggcgtcgcc
gccgacaagctctacccgctggacctggaccgcgccttcaagaaactcgacaccatcaag
aaagacatcgtctggtggggcggcggcgctcaatcgcagcaactgctggcgtcgggtgaa
gccagcatcggccagttctggaatggccgtatctacgccctgcaacaagacggcgccccc
gtgggcgtgagctggaaacagaacctggtcatggccgacttcctggttatccccaagggc
tcgaaaaacaaggatgcggcgatgaagttcctggccaactccagctcggccaaaggccag
gcggacttcgccaacctcaccgcctatgccccggtgaacaaggacagcgtgagcctgctc
aagcctgaactcgcgccgaacctgcccactgcctacgctaaggatcagatcaccctcgac
ttcgcctactgggccaaaaacggcccggctatcgcgacacggtggaacgaatggctggtc
aaatga
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