Stutzerimonas stutzeri DSM 10701: PSJM300_00690
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Entry
PSJM300_00690 CDS
T02182
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03030
DNA replication
psj03410
Base excision repair
psj03420
Nucleotide excision repair
psj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSJM300_00690
03410 Base excision repair
PSJM300_00690
03420 Nucleotide excision repair
PSJM300_00690
03440 Homologous recombination
PSJM300_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psj03032
]
PSJM300_00690
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_00690
Enzymes [BR:
psj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSJM300_00690
DNA replication proteins [BR:
psj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSJM300_00690
DNA repair and recombination proteins [BR:
psj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSJM300_00690
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSJM300_00690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AFN76222
LinkDB
All DBs
Position
145002..147746
Genome browser
AA seq
914 aa
AA seq
DB search
MSQTPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDELFAEYKSHRPPMPDDLRGQIEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVRTKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGISGGLKGLYDNLDQVAALPIRGAKSLGAKLEEHREA
AFMSYELATIKIDVPLDVQVADLMPGEPHREALIALYRELEFKQWLDELLREAKAAGENC
EVAPEDCSIQAEAQYDTILEQAEFDAWLARLQAADCFAFDTETTSIDAQQAQLVGVSFAI
ETGKAAYVPLCHSYMGVPQQLDRDAVLAALKPLLEDPKKQKICQHGKYDMNVLMHYGIEL
RGQAYDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHETLLGKLEATPSLLEVLREIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGEKLVALEREAYELAGEEFNLGSPKQLCAILYEKLGCPVLSKTAGGQPSTAESVLA
ELADRDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNGLDVH
RATAAEVFGVELAQVTSDMRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRAQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQESGLDARVILQVHDELVLEVREDLLDQVRDAISPLMSQAAELDVPL
LVETGVGANWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacgcccctcgttctggtggacggttcgtcctacctttaccgcgccttccac
gccctgccgccgctgaccacctccaccggcaaaccgaccggcgcggtgaagggcgtgttg
aacatgctgctgtcgctgcgccggcaatatccggacagccccttcgccgtggtcttcgat
gccaagggcccgaccttccgcgacgagctgttcgccgaatacaaatcccaccgcccgccg
atgccggatgatctgcgcggccagatcgagccactgcatgccagcgtgcgtgcgctgggc
ctgccgctgctctgcgtcgagggggtcgaggcggatgacgtgatcggcaccctggcgcgg
caatgcgcggcgctggggcgcgacgtggtgatttccaccggcgacaaggacatggcgcag
ctggtctgcccgcacgttaccctggtcaacaccatgaccggtagcgtctacgacatcgaa
ggcgtacgcaccaagttcggtgtcgggccggagctgataatcgattttctcgcgctgatg
ggcgacaaggtcgacaacattcctggcgtgcccggcgtcggcgaaaaaaccgcctgcggc
ctgcttaacggcatttccggcggactcaaggggctctatgacaatctcgaccaggtcgcg
gcgttgccgattcgtggcgccaaatccctgggggccaagctggaggagcaccgcgaggcg
gccttcatgtcctacgaactggcgaccatcaagatcgatgtgccgctggatgtgcaggtg
gccgacctgatgcccggcgagccgcaccgcgaggcgctgatcgcgctctaccgcgaactg
gagttcaaacagtggctcgacgagctgctgcgcgaggccaaggcggcaggcgagaattgc
gaagtcgcccccgaggattgttcgatccaggccgaggcgcagtacgacacgattctcgaa
caggccgagttcgacgcgtggctggcccgtctgcaggccgccgattgcttcgccttcgat
accgagaccaccagcatcgacgcgcagcaggcgcaactggtgggggtttccttcgccatc
gagaccggcaaggccgcctacgtgccgctgtgccattcctacatgggggtaccgcagcaa
ctggatcgcgacgcggtactcgctgcgctcaagccgctgctcgaagatccgaagaagcag
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagctg
cgcggccaggcctacgacaccatgctcgaatcctacgtgctggacgccaccgccacccgc
cacgacatggacagcctggcgctgaagtacctcggccgcggcaccatccgcttcgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggg
ccttacgcggccgaggatgccgacgtcaccctgcgtctgcacgagacgctgctgggcaag
ctggaggcgacgccgtcgctgctcgaggttctgcgcgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgccttggtcgacgcacagctgcttggccagcag
agcgtggaactgggcgaaaagctcgttgccctggagcgcgaggcctatgaactcgccggc
gaggaattcaacctcggctcgcccaagcagctttgcgccatcctctatgaaaagctcggc
tgcccggtgttgtcgaaaaccgccggtggccagccctcgacggccgaaagcgtactggcc
gaactggccgatcgtgactatccgctgccaaaagtgatcatgcagcaccgtagcttgagc
aagctcaagggcacctacaccgacaagttgccgcagcagatcaacccgcgcaccgggcgc
atccacaccagttatcaccaggcggtgacggcgaccgggcgcctgtcctcgtccgacccg
aacctgcagaacatcccgatcagaacggccgaagggcggcgcatccgccaggccttcgtc
gccgcgcccggctacaagctgctggcggccgactactcgcagatcgagctgcgcatcatg
gcgcacctggcgcaggatgcgggcttgctgcatgccttccagaacgggctggacgtgcat
cgcgccactgccgccgaggtctttggcgtcgagctggcacaggtcaccagcgacatgcgg
cgcagcgccaaggcgatcaacttcggtctgatctacggcatgagcgcgttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggaatacatcgatcgttacttcgcccgc
tatcccggcgtgctggcctacatggagcgcacccgcgcccaggccgccgagcagggctac
gtcgagacgctgttcggccgtcgcctctacctgcccgagatcaactccaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgctcccatgcagggcaccgcggcggac
atcatcaagcgcgccatgatcgcggtggatggctggctgcaggagagcggcctggatgcc
cgggtgatcctgcaggtacacgatgaactggtgctggaggtgcgcgaggacctgctggat
caggtacgcgacgccatcagcccgctgatgagtcaggccgccgagctggacgtgccgctg
ttggtggaaaccggcgtgggcgctaactgggatgaggcgcactga
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