Stutzerimonas stutzeri DSM 10701: PSJM300_01185
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Entry
PSJM300_01185 CDS
T02182
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03420
Nucleotide excision repair
psj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSJM300_01185 (uvrD)
03430 Mismatch repair
PSJM300_01185 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_01185 (uvrD)
Enzymes [BR:
psj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSJM300_01185 (uvrD)
DNA repair and recombination proteins [BR:
psj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSJM300_01185 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSJM300_01185 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
TnpC_reg
Motif
Other DBs
NCBI-ProteinID:
AFN76319
LinkDB
All DBs
Position
complement(248503..250692)
Genome browser
AA seq
729 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLNQVERASLHSIL
SVTFTNKAAAEMRQRIEQLLQVNPQGMWVGTFHGLAHRLLRAHWQEAKLEQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPQNIQAGGDLFLATQLKIYEAYE
QACARAGVIDFSELLLRALDLWRNHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLQQFSQDFPDAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIREGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRHNDAALERVINLPARGI
GEKTVETLRQLARQEEISLWAALHQAVGTKLVSGRAASALNGFVELIDTLALKVEGMQLH
SMAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDNYSDEQEDEQTPLAAFLD
HASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLIVTYAETRRLYGSETYNKISRFVREIPPALIQEVRLSNTVSRSFNN
RGMSGSSLFDGAGVPDTPFNLGQRVRHSLFGEGTILNFEGAGAQARVQVNFEDEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctcttctcctgaactccctcaacgatgcccagcgccaggccgtg
gccgcgccgctgggccgccaactggtgctcgccggtgccggctcgggcaagacccgggtg
ctggtgcaccgcattgcctggctcaaccaggtcgagcgcgcctcgctgcattcgatcctc
tcggtgaccttcaccaacaaggccgccgccgagatgcgccagcgcatcgagcagctgctg
caggtcaacccgcaaggcatgtgggtcggcaccttccacggcctggcgcaccggctgttg
cgcgcgcactggcaggaagcgaagctggagcagaacttccagatcctcgattccgacgac
cagcaacgtttggtcaagcgggtgatccgcgagctgggcctcgacgagcagcgctggccg
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgaaggcctgcgcccgcagaac
atccaggccggcggcgacctgttcctcgccacccagctgaagatctacgaagcctacgag
caggcctgcgcccgcgccggggtgatcgacttctccgagctgctgctgcgcgcgctggac
ctgtggcgcaatcatccgggactgctggagcattaccagcggcgcttccgccatgtactg
gtggacgaattccaagacaccaacgccgtgcagtacgcctggctgcgcctgctcgccaag
ggcggcgagagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgcggatcgagaacctgcagcagttcagccaggattttccagacgccgagaccatccgt
ctggagcagaactaccgctccaccgcctgcatcctcaaggccgccaacgcgctgatcgct
aacaaccagggccgcctgggcaaggagctgtggacttccggctgcgaaggcgagccgatc
agcctgtatgccgcgttcaacgagcacgacgaagcgcgctacgtggtcgagagcatcgag
aaggccatccgtgagggcatgagccgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggcactgctgcgcgagaagatcccctatcgcatctacggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgatc
cagacccgccacaacgatgcggcgctggagcgggtgatcaacctgccggcccgcggcatc
ggcgagaagaccgtcgagaccctgcgccaactggcgcgccaggaggaaatctcgctgtgg
gcggcgctgcaccaggcggtcggcaccaagctcgtctccggccgcgccgccagcgcgctg
aacggcttcgtcgaactgatcgacaccctcgcgctgaaagtcgagggcatgcagttgcac
agcatggcgcagctggtcatcgagcagtccggtctgctcgcctatcaccgcgacgaaaag
ggcgagaaggcccaggcgcgggtggaaaacctcgaggaactggtgtccgccgcacgtgcc
ttcgacaactacagcgacgagcaggaggacgagcagacgccgctggcggccttcctcgac
cacgcctcgctggaggccggcgaacagcaggccggcgatcacgaggacagcgtgcagctg
atgactctgcacagcgccaagggcctggaattcccactggtattcctggtgggcatggag
gaaggcctttttccgcacaagatgagcctggaggagtccggccgtctggaagaggaacgc
cgtctggcctacgtcggcatcacccgcgccatgcagcagctgatcgtcacctacgccgag
acccgacgcctgtacggcagcgagacctacaacaagatctcgcgcttcgtccgtgagatc
ccgccggcgctgatccaggaagtgcggttgagcaacaccgtcagccgctcgttcaacaac
cgcggcatgagcggctcgtcgctgttcgacggcgccggcgtgccggatacccccttcaac
ctcggccagcgcgtgcgtcactcgctattcggcgaaggcaccatcctcaacttcgaaggc
gccggcgcccaggcgcgggtgcaggtgaatttcgaggatgaaggcagtaaatggttgatg
ttgagctacgccaagctcgaagcgctttga
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