Stutzerimonas stutzeri DSM 10701: PSJM300_05135
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Entry
PSJM300_05135 CDS
T02182
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psj03016
]
PSJM300_05135
Enzymes [BR:
psj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PSJM300_05135
Transfer RNA biogenesis [BR:
psj03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PSJM300_05135
Prokaryotic type
PSJM300_05135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFN77101
LinkDB
All DBs
Position
complement(1124895..1125857)
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AA seq
320 aa
AA seq
DB search
MDLLFLGTSSGIPTRARNVSGLALLEDSGKGWYLIDCGEATQHQLLRTPLTLHGLRAICI
THVHGDHCYGLPGLLASAGMARRQEPLDIIAPEGIEDWLRATFAMSRTGLPFELRFHAAE
SLGQWRTPQVRVKVAALSHRVPSYGYSFTEARPDPKLAIDRLERDNIPRGPLWGQLARGF
DVEHEGRRLRSETYLDFGRRPRRIVIGGDNDRPELLADTCRAAQVLVHEATYTQPAATAA
RGQFGHSTAAQVAAFAENVGLPNLVLTHFSARYQAKADGGFSIEDVRAEASAAYRGRLFL
AQDFMRLHLDKDGELRPVTA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgctctttctcggcacctcgtccggaatacccaccagggcgcgcaacgtcagc
gggctggccctgctggaagacagcggcaagggctggtacctgatcgactgcggcgaggcc
actcagcatcagttgctacgcacaccgctgacgctgcacggcctgcgcgccatctgcatc
acccacgtgcacggcgaccactgctacggcctgccgggtttgctcgccagtgccggcatg
gcgcgccggcaggagccgctggacatcatcgcccctgaaggcatcgaggactggctacgc
gcgacctttgccatgagccgcaccgggctgccgttcgagctgcgcttccatgcggcggaa
agcctcggccaatggcgcactccgcaggttcgcgtcaaggtcgccgccctctcccatcgt
gtgccctcttacggctacagcttcaccgaagcccgtcccgatccgaagctcgccatcgat
cgcctggagcgcgacaacattccccgcggcccgctctggggccagctggcacgcggcttc
gacgtcgagcatgagggccgcaggctacgcagcgagacgtatctcgacttcggtcgccgc
ccgcgacgcatcgtcatcggcggcgacaacgaccgtccggaactgctcgccgacacctgc
cgggccgcccaggtgctggtgcacgaggcgacctacacccagcctgcggccaccgcggcc
cgcggccagttcggccacagcaccgccgcccaggtggcggctttcgcagagaacgtcggg
ttgccgaacctggtgctgacgcacttcagcgcgcgctaccaggcaaaggccgatggcggc
ttctccatcgaggacgttcgtgcggaggcgtcagcggcgtatcggggccggttgttcctg
gcccaggacttcatgcgcctgcatctggacaaggatggggaactgcgacctgtcacagcc
tga
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