Stutzerimonas stutzeri DSM 10701: PSJM300_07905
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Entry
PSJM300_07905 CDS
T02182
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSJM300_07905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_07905
DNA repair and recombination proteins [BR:
psj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSJM300_07905
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSJM300_07905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
AAA_30
UVR
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFN77651
LinkDB
All DBs
Position
1686791..1688806
Genome browser
AA seq
671 aa
AA seq
DB search
MSQFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTL
VLAPNKTLAAQLYGEFKAFFPRNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLAGLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEKIKVELKDRLDYLRSQNKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRESGEAPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
IEVRPALTQVDDLLSEITKSVAKEERVLVTTLTKRMAEDLTDYLGDHGVKVRYLHSDIDT
VERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADSITGSMQRAIDETERRRNKQIAFNEAHGIVPQGVVKDVQDILEGATV
PGSRSKKRRGEAKAAEEAARYESELRSPSEITKRIRQLEERMLLQARDLEFEAAAQTRDE
IHKLRERLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatttgaactggtcacccgattcaagcccgctggtgaccagcccgaagccatt
cggcagatgatcgaaggcatcgaggccgggttgtcgcaccagacattgctgggcgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccacgtgcagcgcccgaccctg
gtgctggcaccgaacaagaccctggcggcgcagctctacggcgagttcaaggcgttcttc
ccgcgcaacgcggtggagtatttcgtctcctactacgactactaccagcccgaggcctat
gtaccgtcgtcggacaccttcatcgagaaggatgcctcgatcaacgaccatatcgagcag
atgcgcctgtccgcgaccaaggcgctgctggagcgcaaggacgccatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcgatccgcagtcgtacctgaagatggtattgcacgtc
gaccgcggcgaccgcctcgatcagcgcgagcttctgcgccgcctggccggcctgcaatac
acccgcaacgatatggatttcgcccgcgcgaccttccgcgtgcgcggcgacgtgatcgac
atcttcccggccgaatccgatctggaagcggtgcgcatcgagctattcgacgacgaggtg
gaaagcctctcagccttcgacccgctgaccggcgaggtgatccgcaagctgccacgcttc
accttctatcccaagagccactacgtgacgccgcgcgaaaccctgctcgaggcggtggag
aagataaaggtcgagctcaaggaccggttggactacctgcgcagccagaacaagctggtg
gaggcgcagcgcctggagcagcgcacgcgcttcgatctggaaatgatcatggagctgggc
tactgcaacggcatcgagaactactcgcgctacctctcgggtcgcgaaagcggcgaagcg
ccgccgacgctgtacgactacctgccggccgatgcactgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgccatgtacaaaggcgaccgctcgcgcaaggaaacccta
gtggaatatggcttccgcctgccgtcagcgctggacaaccggcccatgcgcttcgacgag
tgggaggcgatcagcccgcagaccatcttcgtttccgcgacgccgggaccgtacgaggcc
gagcacgccgggcgcgtggtcgagcaggtggtgcggccaacggggttggtcgatccgcag
atcgaagtgcgtccggcgctgacccaggtcgatgatctgctctcggaaatcacgaagagt
gtggccaaggaagagcgtgtgctggtcaccaccctgaccaagcgcatggccgaagacctg
accgactacctcggcgatcacggcgtcaaggtgcgctatctgcactcggacatcgatacg
gtggagcgcgtcgagatcatccgcgatctgcgcctgggcgtcttcgacgtgctggtgggc
atcaacctgctgcgcgaggggctggacatgccggaggtgtcgctggtggctatcctcgat
gcggacaaggaaggcttcctgcgttccgaacgctcgctgatccagaccattggccgtgcg
gcgcgcaacctcaacggtcgggcgattctctacgccgactcgatcaccggctcgatgcag
cgcgccatcgacgagaccgagcgccgccgcaacaagcagatcgccttcaacgaggcccac
ggcatcgtgccgcagggcgtagtcaaggatgtgcaggacattctcgaaggcgccaccgtg
ccgggttcgcgcagcaagaagcgtcgcggggaggccaaggcggcggaagaggcggcgcgt
tacgaaagcgaactgcgctcgcccagcgaaatcaccaagcggattcgccagttggaagag
cgcatgctgctgcaggcgcgcgacctggagttcgaggcggccgcacagacccgcgacgag
atccacaagctgcgcgagcgattgctgcaggtgtag
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integrated database retrieval system
