Stutzerimonas stutzeri DSM 10701: PSJM300_10040
Help
Entry
PSJM300_10040 CDS
T02182
Name
(GenBank) rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PSJM300_10040
09124 Replication and repair
03420 Nucleotide excision repair
PSJM300_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psj03021
]
PSJM300_10040
03036 Chromosome and associated proteins [BR:
psj03036
]
PSJM300_10040
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_10040
Enzymes [BR:
psj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PSJM300_10040
Transcription machinery [BR:
psj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PSJM300_10040
Chromosome and associated proteins [BR:
psj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PSJM300_10040
DNA repair and recombination proteins [BR:
psj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PSJM300_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AFN78074
LinkDB
All DBs
Position
2189004..2191295
Genome browser
AA seq
763 aa
AA seq
DB search
MGRGVAVSYRVAVRALCEFTAKQGDLDLRFTPSPTAQEGIAGHGQVAARRGEGYEREVAL
EGHYRNLQVRGRADGYDPATNRLEEVKTYRGDLTRQPDNHRQLHWAQAKVYGWLLCKARG
LPSLSIALVYYDVVTQKETAIVETFAAESLRAFFEMQCERFIDWAEQEMAHRACRDQALD
TLRFPYREFRAGQRQLAEAVYKAVCTGTHLMAQAPTGIGKTLATLFPPLKAFPGQKLDKL
FFLTAKTPGRRLALDALSRLAPSDAPLALRVLELVARDKACEHPDKACHGESCPLAKGFY
DRLPAARAAALSRPHLTQAVLREIALQHQVCPYYLGQEMARWADVVIGDYNYYFDVSALL
HGLTQANQWRICVLVDEAHNLLERGRSMYSASLDFRNFKDLPSSSPEVLKKSLRRILRCW
RELHAEQNTSYVVHSQLPGKLIFALQQAISAITEYLGEHPSGLDPTLQNAYFEATHFCRI
AELFGEHSLFDCSLLPARRQNADRGSLLCIRNVLPAPFLEPRLRQARTAVLFSATLSPRQ
FYADTLGLPVNNVWLEAQSPFSAEQLQVRLARHISTRYEHRSASLQAVVQLLARQYRARP
GNYLAFFSSFDYLQQVSAMLAAQHPDLPFWEQTRGMDETERAAFLERFTCDGRGIGFAVL
GGAFGEGIDLPGERLIGAFIATLGLPQMNPVNEQLKIRMDALFGKGYDYTYLYPGLQKVV
QAAGRVIRTTEDQGVVHLIDDRFARPQVRRLLPGWWQVTDLSN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggccggggcgtcgccgtgagctatcgggtcgccgttcgcgcgctctgcgagttcacc
gccaagcagggcgatctggacctgcgcttcaccccctcgcccaccgcgcaggaaggtatc
gccggccatgggcaggtagcggcacgccgtggcgaaggctatgaacgggaggtggcgctg
gaaggccactaccgcaacctgcaggtacgtggtcgcgcggatggctacgacccggcaacc
aatcgcctggaagaggtcaagacctaccggggcgacctcacgcgtcagccggacaaccat
cgtcaattgcactgggcgcaggcgaaggtgtacggctggctgctgtgcaaggcccgcggc
ctgccatcgctgagcatcgccctggtttactacgacgtcgtcacgcagaaggaaacggcg
atcgtcgagaccttcgcggccgaatctctgcgtgcctttttcgagatgcagtgcgagcgc
ttcatcgactgggccgagcaggaaatggcgcatcgcgcctgccgcgatcaggcgctggac
acccttcggttcccctatcgtgaattccgtgccggccagcgccagttggcggaagcggtg
tacaaggccgtctgtaccggcacccacctgatggcccaggcgcctaccggcatcggcaag
acgctggccacgctttttccgccgctgaaggcctttcccggccagaagctggacaagctg
ttcttcctcaccgccaagactccggggcggcgcctggcgctggatgccttgagccgcctg
gcgccaagcgatgcgccacttgcgctgcgggtattggaactggttgcccgcgacaaggcc
tgcgagcaccccgataaagcctgccacggtgaatcctgtccgctggcgaagggcttctac
gatcgcttgccggcggctcgcgcggccgcactgtcacgccctcatctgacccaggccgtg
ttacgcgagatcgccttgcagcatcaggtctgcccctattacctcggccaggaaatggct
cgctgggccgatgtggtcatcggcgattacaactactacttcgacgtcagcgccctgctc
catggattgacgcaggccaaccagtggcgcatctgcgtgctggtggacgaagcgcacaat
ttgttggaacgtggccgaagcatgtacagcgccagtctggatttccgcaatttcaaggac
ttgccttcctcttctccagaagttctgaagaagtccctgcggcgtattctgcgttgctgg
cgcgagctgcacgctgaacagaacacctcctatgtcgtccattcgcaattaccgggcaaa
ttgatcttcgcattgcagcaggccatcagcgccatcaccgaatacctcggcgagcatccg
agcggactcgacccgacgctgcaaaacgcctacttcgaggcgacgcacttctgccgtatc
gccgagctgttcggcgagcattcgctgttcgattgcagcctgctgccagcacgccggcag
aacgccgaccggggttcgctcctgtgcatccgcaacgtgctaccggcgccttttctggag
ccacgcttgcggcaggcgcgcaccgccgtgctgttctccgcaacgctcagcccacgacag
ttctacgccgatacgctgggcttgccggtgaacaacgtatggctcgaagcgcagtcgccg
ttcagcgccgagcaattgcaggtccgactcgcgcggcacatctcgacgcgctacgagcac
cgcagcgcctcgctgcaggcagtggtgcagttgctggcccgccagtaccgggcgcgcccg
ggcaactacctggcgttcttcagcagtttcgattacctgcagcaggtcagcgccatgctg
gccgcacagcatccggacctgccgttctgggagcagacgcgcggcatggatgaaaccgag
cgtgcggcctttctggagcgcttcacctgtgacggtcgcggcatcggcttcgccgtactg
ggcggagcgttcggcgaaggcatcgatctgcccggcgaacggctgatcggcgccttcatc
gccacccttgggctgccgcagatgaatccggtcaacgagcaactgaagatccgcatggat
gccttgttcggcaagggctacgactacacctacctctaccccggtctgcaaaaggtggtg
caggcggccggccgcgtcatccgtaccaccgaggaccagggtgtggtgcacctgatcgac
gatcgcttcgcccgtccgcaggtgcggcgcctgttgcccggctggtggcaagtcactgac
ttgagcaactag
DBGET
integrated database retrieval system
