Stutzerimonas stutzeri DSM 10701: PSJM300_15300
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Entry
PSJM300_15300 CDS
T02182
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psj03016
]
PSJM300_15300 (truB)
Enzymes [BR:
psj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSJM300_15300 (truB)
Transfer RNA biogenesis [BR:
psj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSJM300_15300 (truB)
Prokaryotic type
PSJM300_15300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AFN79122
LinkDB
All DBs
Position
complement(3337821..3338738)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRVRRAVSGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTADAEGEVLERRPVDVSREQLEAILPRFRGDIQ
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLSLEADKARLAVACSKGTYI
RTLVEDIGRELGCGAHVAELRRTQAGPFELSQTVTLETLEQAHAEGGAEAVDAFLQPVDS
GLEHWPLLQFSEHSAFYWLHGQPVRAPEAPQFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtaaaacgtgtgcgccgcgcagtcagcggcatcattctcctcgacaagccg
cgtggctttacgtccaacgccgcgctgcagaaggttcgctggttgctcaatgccgagaag
gccgggcataccggcagtctcgatccgctcgctaccggcgtgctgccgctgtgcttcggt
gaagccaccaagttctcccagtacctgctcgatgccgacaagggctacgagacgctggcc
cagctgggcgtcaccaccaccaccgccgatgcggaaggcgaagtgctcgagcgcaggccg
gtggatgtcagccgggagcagctcgaagccatattgccgcgttttcgcggggacattcag
caggtgccgccgatgtactcggcgctcaagcgcgacggtcagccgttatacaagctggca
cgtgccggagaggtagtggagcgcgagccgcgttctgttaccattgcgcgcctggagctg
ctttcgctggaggcggacaaggcccggctcgcggtagcgtgcagcaagggcacctatatc
cgcaccctggtcgaggacatcgggcgcgagctgggttgcggggcgcatgtggccgagctg
cggcgcactcaggcagggccgttcgagctgagccagaccgtcacgctcgagacgctcgag
caggcccatgccgaaggcggcgcggaggcggttgacgctttcctccagccggtcgacagc
ggcctggaacattggccgctgttgcagttttcggagcacagcgccttttactggctccac
gggcagccggtgcgagccccggaagcacctcagttcgggatggttcgggtgcaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ttgattcggtcggtatga
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