Stutzerimonas stutzeri DSM 10701: PSJM300_18765
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Entry
PSJM300_18765 CDS
T02182
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSJM300_18765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_18765
Enzymes [BR:
psj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSJM300_18765
DNA repair and recombination proteins [BR:
psj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSJM300_18765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
Mg_chelatase
AAA_28
AAA_17
AAA_25
T2SSE
NTPase_1
PhoH
nSTAND3
TraI_hel_assoc_N
AAA_5
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFN79806
LinkDB
All DBs
Position
complement(4066482..4068551)
Genome browser
AA seq
689 aa
AA seq
DB search
MSEQLSLLDQAPAPMPELQNAASLLALLDAWVEHGWLRALDRALAGFCLELNGESSPLLL
LSAALVSHQLGHGHVCLDLAATLASPDFALSLPPEGDEGSRARLPSELLASVELADWRAA
LAGSALVASGSDDGIEAPLVLHGGRLYLRRYWNYERAVATAIGMRLDDTQTVPVDLPQAL
QRLFPEPPVIDGQRQIDWQKLACALAARGSFSLITGGPGTGKTTTVVRLLALLQEPALAA
GQPLRIRLAAPTGKAAARLTESIGGQVASLPVGEAVKAEIPSEVTTLHRLLGSRPDSRHF
RHHAGNPLALDVLVVDEASMIDLEMMACLLDALPRHARLILLGDKDQLASVEAGGLLGDL
CRDAEGGFYDSQTRAWLEEVGGECLAEAGLQPGDGRQPLAQRTVMLRHSRRFGSASGIGR
LARAVNARAATQAREVFGDGFADLNLLRLRGEQDGALERLLLDGFGEARGYAHYLQKLHA
TRPDANCSVEDPAWQTWAAGVLEAFDGFQLLCAVRRGPWGVEGLNPRIAGMLQRRGLLEA
DSGWYEGRPVLVVRNDYSLGLMNGDIGIALRLPEPAEAPGAAPNQVLRVAFPRNDGSGAL
RFILPSRLNAVETVFAMTVHKSQGSEFAHTALILPDTLNPVLTKELLYTGITRARHWFSL
IETRPGIFDEAVQRQVARRSGLMDGLGKG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaattgtccctgctggaccaggcgcccgcgccgatgcccgagctgcagaac
gccgcgagtctcctggcgctgctcgacgcctgggtcgaacatggctggctgcgtgcgctg
gaccgcgccctggccggcttctgcctcgaactgaatggcgagagctcgccgctgctgctg
ctctccgcggcgctggtcagccatcagctgggtcatggccatgtctgcctggacctggcc
gccaccctggccagcccggattttgccctgtcgctgccacccgagggcgacgaaggcagt
cgcgcacgcctgccgtcggaactgctcgccagcgtcgaactggccgactggcgtgcggca
ttggccggtagcgcgctggtggcgagcggcagcgatgacggcatcgaggcgccgctggtg
ctgcacggcgggcgcctctacctgcgccgctactggaactacgagcgcgccgtggccacg
gccatcggcatgcgcctcgacgatacccagaccgtgccggtcgacctgccccaggcgctg
caacggctgttccccgagccaccggtgatcgacggccagcgccagatcgactggcagaaa
ctcgcctgcgccctggccgcccggggcagcttcagcctgatcaccggcggccccggcacc
ggcaagaccaccaccgtggtacgcctgctggcgctgctacaggaaccggcgctggcggcc
gggcagccgctgcgtattcgtctagcggcgcccactggcaaggcggcggcgcggctgacc
gaatccatcggtggccaggttgcctcgttgccggtgggcgaggcggtaaaagcggaaatc
cccagcgaagtcaccaccctgcaccgtcttttgggcagccgcccggacagccgccacttc
cgccaccacgccggcaacccgctggcgctggacgtgctggtggtggacgaagcctcgatg
atcgacctggaaatgatggcctgcctgctcgacgccctgccgcgtcatgcccggctgatc
ctgctcggcgacaaggaccagctcgcctcggtggaagccggcggcctgctcggcgacctg
tgccgcgatgccgaaggcggtttctacgattcgcagacccgcgcctggctcgaagaggtg
ggcggcgaatgcctcgccgaggccggcctgcaacccggcgacggccgccagcccctggcc
cagcgcaccgtgatgctgcgccactcgcggcggttcggcagcgcctcgggcatcggtcgc
ctggcccgcgcggtcaacgcccgtgccgcaacccaggcgcgcgaagtgttcggcgacggc
ttcgccgacctcaacctgctgcgcctgcgtggcgagcaggacggcgcgctggagcgattg
ctgctggacggcttcggtgaagcccgcggctacgcccattacctgcaaaagctgcacgcc
acccgccccgatgcgaactgctcggtcgaggaccccgcctggcaaacctgggccgccggc
gtgctcgaggcgttcgacggcttccagctgctctgcgccgtgcgcagaggcccctggggc
gtggaagggctcaacccgcgtattgccgggatgctccagcggcgcggtctgctggaagcc
gactccggctggtacgaaggccgcccggtgttggtggtgcgcaacgactacagcctgggc
ctgatgaatggcgacatcggcattgccctgcgcctgcccgaacccgccgaagcgcccggc
gccgcgcccaaccaggtgctgcgcgtggccttcccgcgcaacgacggctccggcgcgctg
cgctttatcctgcccagccgcctcaacgccgtggaaacggtgttcgccatgaccgtacac
aaatcccagggctcggaattcgcccacaccgcgctgatcctgcccgacaccctcaacccg
gtcctgaccaaggaactgctctacaccggcatcacccgcgcccgccactggttcagcctg
atcgaaacccgcccgggcatcttcgacgaagccgtgcagcggcaggtggcacgacggagt
gggttgatggatgggttggggaagggctga
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