Stutzerimonas stutzeri DSM 10701: PSJM300_18775
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Entry
PSJM300_18775 CDS
T02182
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psj
Stutzerimonas stutzeri DSM 10701
Pathway
psj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSJM300_18775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psj03400
]
PSJM300_18775
Enzymes [BR:
psj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSJM300_18775
DNA repair and recombination proteins [BR:
psj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSJM300_18775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFN79808
LinkDB
All DBs
Position
complement(4072201..4075644)
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AA seq
1147 aa
AA seq
DB search
MRDEQTLTPGMMVVHGNRLEELRELAVAWMQRHPLAPLENEVVLVQSNGIAQWLKLALAE
QSGCGIAAAIQLELPARFLWQSYRAVLGSDEIPQLSPLDKAPLTWRLVRLLPALLQDQAF
APLRRFLADDADLRKRHQLAERLADLFDQYQVYRADWLADWAEGRDQLRTSRDGARPLDE
SVRWQPALWRALLEDVGTEQLAGSRAGVHPRFVERLRQLEARPAGLPRRVVVFGISSLPA
QALQALAAMARFTQVLLCVHNPCRHHWGDIVPDQDLLRHQYRRQQRKGGMAPGLSSEALH
QHAHPLLAAWGKQGRDYINLLDMYDEPEHYRERFAAAGQRIDLFGEGDTRHLLGQLQDDI
LDLRPLAETRASWPPVEPAEDRSIRFHIAHSAQREVEILHDQLLAHFSRDASLRPREIIV
MVPDINRYAPHIQAVFGQFAQDDPRYIPFTLADQGQRGREPLLIALEHLLKLPEGRLTVS
EVLDLLDVPALRARFGIEQNDLPTLHRWIEGAGIRWGLDGERRAAFGLDPSLEQNTWRFG
LRRMLLGYAVGRGEACAGIEPYDEIGGLDAALIGPLVRLLDALDQLHRQLDQAVSPARWG
EILRELLAAFFLPCSERDEVLLGQLNDGLETWLELCAEVMLEEPLPLTVVREAWLGALDQ
GRLSQRFLTGAVNFCTLMPMRAIPFRLVCLLGMNDGDYPRSVPPVDFDLMAGDYRPGDRS
RREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLLGQLRDHLAAGWRLAGEGEL
LKALTTEHPLQPFSRRYFEGDGALFSYAHEWARLHQPAALPSTAAALPIFEPDDALSLES
LMGFLRYPVRHFFTQRLKVHLDEEVQEQLDEEPFGIDGLQRYGLQQALLADASLALEGGA
DIEQALQAGARRLQRSGRLPLAGFGERLRDEVLAPLPEQMQRYQAFCELWPERLDSPAAL
AFEHAGVELQGWLGGLRRRPGDSQLLRLELQPGGLKRGESWKWHRLLRPWVVQVTAAACG
LPLTTVLIGEDVSAKFEPVEPEQARDILRGWLEAWRAGMNAPLPVALNTAIAWLSAEDEE
KAEKAARDTFEGSYNRSGEVTGCASLARQFPDLASLLADGDFTEWAHVLYQSLLSARFAA
LKEQAQA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgagcagaccctgacccccggaatgatggtggtgcacggcaaccgcctggag
gagttgcgcgagctggcggtggcctggatgcagcgccatccgctggcgccgctggagaac
gaggtggtgctggtgcagagcaacggcatcgcccagtggctcaaactggcgctggccgaa
cagtccggctgtggcatcgccgcggcgatccagctggagctgccggcgcgctttctctgg
cagagctaccgcgcggtgctgggcagcgacgagattccccaactgtcgccgctggacaag
gcgccgctgacctggcgtctggtgcggctgctgcccgcattgctgcaggaccaggccttc
gccccgctgcggcgctttctcgccgacgacgccgacctgcgcaagcgccaccagctggcc
gagcgcctggccgatctgttcgatcagtaccaggtctaccgcgccgactggctggccgac
tgggccgaaggccgcgaccagctgcgtacctcgcgcgacggcgcgcggccgctggacgaa
tcggtgcgctggcagccggcgctgtggcgcgcgctgctggaagatgtcggcaccgagcag
ctggccggcagccgcgccggggtacatccgcgcttcgtcgagcgcctgcgccagctggag
gcgcgcccggccgggctgccgcggcgggtggtggtgttcggcatttcctcgctgccggcc
caggcgctgcaggcgctggcggccatggcgcgcttcacccaggtgctgctctgcgtgcac
aacccctgtcgccatcactggggcgatatcgttcccgaccaggacctgctgcgccaccag
taccgccgccagcagcgcaagggcggcatggcgccggggctgtccagcgaggcgctgcac
cagcacgcccatccattgctggcggcctggggcaagcagggccgcgattacatcaacctg
ctggacatgtacgacgaaccggagcattaccgcgagcgcttcgcggcggccggccagcgc
atcgacctgttcggcgaaggtgatacccggcatctgctcggccagctgcaggacgacatc
ctcgatctgcgtccgctggccgaaacgcgtgccagctggccgccggtcgaaccggccgag
gatcggtcgatccgcttccacatcgcccacagcgcacagcgcgaggtggagatcctgcac
gaccagctgctggcgcatttcagccgcgacgccagcctgcgcccgcgggaaatcatcgtc
atggtgccggacatcaaccgctacgcaccgcatatccaggcggtgttcggccagttcgcc
caggacgacccgcgctacatccccttcaccctcgccgaccagggccagcgcggccgcgag
ccgctgctgatcgccctggagcatctgctcaagctgccggagggccgcctgaccgtcagc
gaggtgctcgacctgctcgacgtgccggccctgcgtgcgcgcttcggcatcgagcaaaac
gatttgccgacgctgcaccgctggatcgagggcgccggcatccgctggggcctggacggc
gaacgccgcgcggccttcggcctggacccgagcctggagcagaacacctggcgcttcggc
ctgcgacgcatgctgctcggctatgcggtgggccgcggcgaagcctgcgccggcatcgag
ccctacgacgagatcggcggcctggacgccgcgctgatcggtccgctggtgcgcctgctg
gacgcgctcgatcaactgcatcggcaactcgatcaggccgtgagcccggcccgctggggc
gaaatcctgcgcgagctgctggcggccttcttcctcccctgcagcgaacgcgacgaggtg
ctgctgggccagctgaacgacggcctggaaacctggctggagctctgcgccgaggtgatg
ctggaagagccgctgccgctcaccgtggtgcgcgaggcctggctcggcgcgctcgaccag
ggtcgcctgagccagcgcttcctgaccggcgcggtgaatttctgcacgctgatgccgatg
cgcgcgattcccttccggctggtctgcctgctgggcatgaacgacggcgactacccgcgc
agtgtgccgccggtggacttcgatctgatggccggtgattaccggcccggcgaccgctcg
cggcgcgaggacgaccgctacctgctgctcgaggcgctgctgtccgcccgcgaccagctc
tacgtcagctgggtcggccgcagcatccgcgacaacagcgagcggcccgcctcggtgctg
ctcggccagttgcgcgatcacctggcggcgggctggcgcctggccggcgagggcgagctg
ctgaaggcgctgaccaccgagcacccgctgcaacccttcagccgccgctatttcgaaggc
gacggggcactgttcagctatgcccacgaatgggcgcggttgcatcagccggccgcgctg
ccatcgaccgcagcggcactgccgatattcgagccggacgatgctctgagcctggaaagc
ctgatggggttcctgcgctatccggtgcggcacttcttcacccagcggctcaaggtgcac
ctggacgaggaggtgcaggagcagctcgacgaggagcctttcggcatcgacggcttgcag
cgctacggcttgcaacaggcgctgctggccgacgccagcctggcgctggaaggcggcgcc
gatatcgaacaggccctgcaggccggcgcgcggcgcctgcaacgcagcggccggctgcca
ctggccggctttggcgagcgcctgcgcgatgaggtgctggcgccgctgccggaacagatg
cagcgctaccaggccttctgtgagctgtggccggagcgcctggattctcccgccgcgctg
gccttcgagcatgccggggtcgagttgcagggctggctcggcggcttgcgccgacgcccc
ggcgattcgcaactgctgcgcctggaactgcagcccggcggcctcaagcgcggcgagagc
tggaagtggcatcgcctgctgcggccctgggtggtgcaggtgacggcggcggcctgcggg
ctgccgctgaccacggtgctgatcggcgaggacgtgagcgcaaagttcgagccggtcgag
ccggagcaggcccgcgacatcctgcgcggctggctggaggcctggcgcgccgggatgaac
gcgccgttgccggtggcgctgaacaccgccatcgcctggctgagcgccgaggatgaggaa
aaagccgaaaaggccgcccgcgacaccttcgagggcagctacaaccgcagcggcgaagtg
accggctgcgccagcctggcgcggcagttcccggatctcgccagcctgctggccgacggc
gatttcaccgaatgggcccacgtgctctaccaatcactgctcagcgcccgattcgccgcg
ctcaaggagcaagcccaggcatga
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