Pseudoalteromonas sp. JSTW: GZH31_00105
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Entry
GZH31_00105 CDS
T10506
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psjs03009
]
GZH31_00105 (rsmB)
Enzymes [BR:
psjs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GZH31_00105 (rsmB)
Ribosome biogenesis [BR:
psjs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GZH31_00105 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_11
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QLJ08326
LinkDB
All DBs
Position
complement(23029..24318)
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AA seq
429 aa
AA seq
DB search
MSNVRALAAETLYNVVDKGASLNQELPFASQGLSPKDKALLQQICYGVLRYLPSLENYCQ
QLLDQPLKGKRRIFQFLLYVGIYQLQHMRVPPHAAISETVNALQQMRALGLKGLINAILR
SFQREQAELEEKAKQIPVCQYNHPGWFIKHVTAAYPDNWQDILEANQQQAPMWLRVNQAQ
YSTQEYSDMLKANDIEHSLNADFPDGIKLAKPCDVFSLPEFETGACSVQDAAAQLAARFL
DPQDDELILDACAAPGGKTCHILELADADVLALDSDSERLERVKQNLVRIGLAADLQCAD
ASQPHIWWDEKQFDRILLDVPCSATGVIRRHPDIKWLRRASDIEDLAHLQGDILNSIWPL
LKPGGTLVYATCSVLPQENQQQVATFLANNSNAEHIPLHENDTPTLPGLQLLPGESDGFY
YAKLVKKHS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgttagagcacttgctgctgaaactctgtataacgtggttgataaaggtgca
tcgttaaaccaagaattgccctttgcaagccaaggtttatcgccaaaagataaagcctta
ctacaacaaatttgctacggtgtgctgcgttatttacctagcctcgaaaattactgtcag
caacttttagatcaaccgctaaaaggcaagcgccgtattttccagttcttgctgtatgtg
ggcatttaccaacttcagcatatgcgtgttccaccgcatgctgctatcagtgaaaccgtt
aatgcattacaacaaatgcgtgcgctaggtttaaaaggcttaattaacgctattttacga
agtttccaacgtgaacaagccgagcttgaagaaaaagccaagcaaatccctgtttgccaa
tacaaccacccagggtggtttattaagcacgttacggcagcctaccctgataactggcaa
gatattcttgaagcaaaccaacaacaagctccaatgtggttacgtgtaaatcaagcacaa
tatagcacgcaagaatacagcgacatgctcaaagcaaatgacattgaacacagcctcaat
gctgattttccagatggtattaaacttgccaagccatgcgatgtattttctttacctgag
tttgaaacaggtgcatgctctgttcaagatgcggcggcgcagttagcagcacgtttttta
gatccacaagatgatgagctgattcttgatgcctgtgcagcgccaggcggtaaaacctgc
catattttggagcttgctgatgccgatgtattagcactagatagcgacagtgaacgctta
gagcgtgtaaagcaaaatttagtacgtattggccttgccgctgatttgcagtgtgccgat
gcatcacagccgcatatttggtgggacgaaaagcagttcgatcgaattttacttgatgtg
ccttgttctgccaccggtgttattcgtcgccaccctgatattaaatggttgcgtagagca
tcagatattgaagaccttgcacacttacaaggtgatattctcaacagtatctggcctctg
cttaaaccgggtggtacgttagtgtatgcaacctgctcagtgttaccacaagaaaatcag
caacaagttgccacgtttcttgctaacaacagcaatgcagagcatataccactgcatgaa
aacgatactccaacgttacctggcttgcaattgctaccgggtgagagcgatggtttctac
tatgcaaagctagttaaaaaacattcataa
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