Pseudoalteromonas sp. JSTW: GZH31_00715
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Entry
GZH31_00715 CDS
T10506
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03420
Nucleotide excision repair
psjs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GZH31_00715 (uvrD)
03430 Mismatch repair
GZH31_00715 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_00715 (uvrD)
Enzymes [BR:
psjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GZH31_00715 (uvrD)
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GZH31_00715 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GZH31_00715 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
GREB1_2nd
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QLJ08429
LinkDB
All DBs
Position
complement(144829..146994)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSELLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRSRVEETLKAPVGGMWIGTFHGLSHRILRAHHREAKLPESFQILDSDDQQ
RMIKRLLKAMNIDDKKWPAKQFSWYISAKKDEGLRPKDIQAYDINEQMMLKVYAAYQEAC
DRAGLVDFAEILLRCYEVLNNHPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGNTN
SIMIVGDDDQSIYGWRGARIENIKRFLTDFEAETIRLEQNYRSTATILKASNALIKNNAE
RMGKSLWTDGNEGEPISVYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRNNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALSYLRLVGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARNESLPLWYAAKAIIEQQHLSGRAASAVTKFLELVEHIEDKISDLTLEEQAK
YAIQTSGLMAMYQAEKGEKGRARVENLEELISACGQYELPEDEEFSSPLQGFLAYTSLES
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMEKLYISHAETRRLYGQEKYHSPSRFLREMPEDCVEEIRIKTQVSRPPAAGRFSSS
VTHAAFEDSGFNLGQRVLHAKFGVGTVLNYEGSGAQSRIQVNFDDLGSKWLVTQYARLQA
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaattactcgatggcttaaatgacaaacaacgggatgcagtcgcagcc
ccattgcaaaatatgctagtacttgctggtgcaggttctggtaaaactcgagtacttgtt
catcgtatcgcatggctaatgcaagttgagcaagcctctgcctacagtatttttgcggtc
acctttaccaataaagctgcaaaagagatgcgctctcgcgtagaagaaaccttaaaagcg
cctgttggtggcatgtggattggcactttccacgggttgtctcaccgtattttgcgtgca
catcatcgtgaagcaaaattacctgaaagctttcaaatcttagattcagacgatcagcag
cgaatgatcaaacgcttacttaaagcaatgaatatcgatgataaaaagtggccagcgaaa
cagtttagctggtacatcagtgctaaaaaagacgaaggtctgcgccctaaagatattcag
gcttacgatatcaatgagcaaatgatgctgaaagtttatgcagcatatcaagaagcatgt
gatcgtgctggtttggtcgactttgcagaaattttattacgctgctacgaagtacttaac
aatcaccctacgctactgcgtcattatcagcagcgttttgctcatatgttggtagacgag
ttccaagataccaatacgattcaatatgcttggttaaagctgctagcaggaaacaccaac
agcattatgatagtaggtgatgatgaccaaagtatctatggttggcgcggtgcacgtatt
gagaatattaaacgctttttaaccgacttcgaagccgaaaccattcgtcttgaacagaac
taccgctcaacagccacaatattaaaagcctccaatgcgctaattaaaaataatgctgaa
cgcatgggtaaaagcctctggaccgatggtaacgaaggtgaaccaatttcggtgtatgcc
gcttttaacgaattagatgaagcccgtttcgtaagcagtaaactgcgtagctggttaaat
gctggtaatgccttgcaagatgccgcgattctataccgtaacaatgcgcaatctcgtgta
ctcgaggaagccatgttacaagaagggcttaaataccgcatttatggcggcatgcgcttc
ttcgagcgtcaagagattaaagacgccctttcgtacctgcgcttagtgggtaatcgccaa
gatgatgccgcctttgagcgcgttattaacacccctgctcgtggcattggagataaaacc
ctcagccacattcgtgactgtgcgcggaacgagtctcttcctctgtggtatgctgcaaaa
gccattattgaacagcagcatctatctgggcgtgcagccagtgcagtaacaaaattttta
gagctggttgagcacattgaagacaaaatcagtgatcttaccttagaagagcaagctaaa
tacgcgattcaaacttcagggttgatggccatgtaccaagctgaaaaaggtgaaaaaggc
cgcgctcgcgtagaaaacttagaagagctcattagtgcctgtggccaatatgagctacct
gaagacgaagaattcagctcaccactgcaaggctttcttgcgtacacttctctcgaatca
ggcgaaggtcaagccgatgagcacgaagatgccgtgcaaatgatgacacttcattcagca
aaaggccttgagttcccgcttgtttttatggtgggtgttgaagaaggcatgtttccttca
cagcaaagtaatgaggagtctggtcgcttagaagaagagcgccgtttgtgttatgtaggc
atgacccgagcgatggaaaagctgtacattagtcacgctgaaactcgccgtttatatggc
caagaaaaataccacagcccctctcgattcttgcgcgaaatgccagaagactgtgttgag
gaaattcgtatcaaaacacaagtttcaaggcccccagccgcaggccgttttagctcatca
gtcacacatgccgcatttgaagacagtggctttaatttagggcaacgcgttttacatgca
aaatttggtgtaggaacggtactaaattatgaaggcagtggtgcacagtcacgtattcaa
gtgaactttgatgatttaggcagtaagtggcttgttactcagtatgcaagacttcaagcc
ttataa
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