Pseudoalteromonas sp. JSTW: GZH31_03305
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Entry
GZH31_03305 CDS
T10506
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psjs03016
]
GZH31_03305
Enzymes [BR:
psjs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GZH31_03305
Transfer RNA biogenesis [BR:
psjs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GZH31_03305
Prokaryotic type
GZH31_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QLJ08899
LinkDB
All DBs
Position
689100..690128
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AA seq
342 aa
AA seq
DB search
MSELNYLYGKPLSKADFKTFAEDFMVDEDLGIEFTGSGEHVCLQVVKKGENTQFIAKRIA
EKAGVSPRDVSYAGLKDRHGVCTQWFSVPVPIKKHIEFSELNNEQFFIIAQQRHNRKLRT
GCHKGNRFTITLRNVTEPLDILCRINAVRAGVPNYFGEQRFGHGGHNLEMAKRMFAGERI
RDKKLRGLVISAARSYVFNEIVSMRVAEHGLAKTMHREVFMLSGSNAFFEDNISDDNIAR
LASGDIVMSAPMVGKGEKGLTETEKQWLLPYQSWIEGLAELGLKNERRMLRLIPESLTVE
TLDETTVKLSFGLPKGCFATALLRELVDYKDASPREQKQKDA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgaattatttatacggaaaaccactatcaaaagccgactttaaaacgttt
gctgaagactttatggttgacgaagacctcggtattgaattcactggcagcggcgagcat
gtgtgcttgcaggtcgtcaaaaaaggtgaaaacacccagtttatagccaagcgaattgcc
gaaaaagcgggcgtatcaccgcgtgatgtaagctatgcgggtttaaaagatcgccacggt
gtttgtacacaatggtttagtgtgcctgtgccgattaaaaagcacattgaatttagtgaa
ctgaataacgagcaattctttattatcgcgcagcagcgccacaaccgtaaattaagaaca
ggctgccacaagggcaatcgatttacgattaccctgcgtaatgtgaccgagcctttagat
attttgtgtcgtattaatgcagtgcgtgctggggtgccaaattactttggcgaacagcga
tttggtcatggagggcataaccttgaaatggctaaacggatgtttgcaggagagcgtatt
cgcgataaaaagctgcgtggtttagtgatttcagcggcccgttcttatgtgttcaatgaa
atagtaagtatgcgtgtagctgagcatggtcttgcgaaaaccatgcaccgcgaagtgttt
atgcttagcggcagtaatgccttttttgaagacaatataagcgatgacaatattgcacgt
ttagcctctggcgatattgttatgtcggcaccaatggtgggcaaaggcgaaaaaggctta
accgaaaccgaaaagcaatggttgctcccttatcagtcttggatagagggattagctgag
cttgggcttaagaatgagcgcagaatgctgcgcttaattcccgagtctttaactgttgaa
acacttgatgagacaactgtaaaactgagttttggtttaccaaaaggctgctttgcaacc
gcgcttttgcgagagctggtggactataaagacgccagcccaagagaacaaaaacaaaag
gatgcgtaa
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